Cluster: CGMR002452_CGC62
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 10
- Substrate: beta-mannan/xylan/beta-glucan
- Genome ID: CGMR002452
- CGC Family ID: CGCFAM_00044
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_76613 | k141_76613_9 | 8666 | 10672 | + | GH13_14 |
| CAZyme | k141_76613 | k141_76613_10 | 10839 | 12515 | - | CBM91 | GH43_12 |
| TF | k141_76613 | k141_76613_11 | 12633 | 16760 | - | HTH_AraC |
| NULL(UNKNOWN) | k141_76613 | k141_76613_12 | 16880 | 17083 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_76613 | k141_76613_13 | 17228 | 20383 | + | 1.B.14.6.1 |
| pfam | k141_76613 | k141_76613_14 | 20403 | 22046 | + | SusD_RagB | SusD-like_3 |
| pfam | k141_76613 | k141_76613_15 | 22071 | 23468 | + | SGBP_B_XBD |
| CAZyme | k141_76613 | k141_76613_16 | 23493 | 25622 | + | GH10 |
| CAZyme | k141_76613 | k141_76613_17 | 25712 | 27346 | + | GH35 |
| CAZyme | k141_76613 | k141_76613_18 | 27374 | 28999 | + | CE20 | CE20 |
| TC | k141_76613 | k141_76613_19 | 29019 | 30503 | + | 2.A.2.3.6 |
| CAZyme | k141_76613 | k141_76613_20 | 30665 | 31795 | + | GH10 |
| CAZyme | k141_76613 | k141_76613_21 | 31807 | 32784 | + | GH43_1 |
| CAZyme | k141_76613 | k141_76613_22 | 32835 | 35396 | + | GH3 |
| CAZyme | k141_76613 | k141_76613_23 | 35421 | 37475 | + | GH67 |
| pfam | k141_76613 | k141_76613_24 | 37478 | 38677 | + | UxuA |
| TC | k141_76613 | k141_76613_25 | 38793 | 40226 | + | 3.A.1.131.2 |
| CAZyme | k141_76613 | k141_76613_26 | 40337 | 42754 | - | GH141 |
Gene ID: k141_76613_9
Type: CAZyme
Location: 8666 - 10672 (+)
Type: CAZyme
Location: 8666 - 10672 (+)
Gene ID: k141_76613_10
Type: CAZyme
Location: 10839 - 12515 (-)
Type: CAZyme
Location: 10839 - 12515 (-)
Gene ID: k141_76613_11
Type: TF
Location: 12633 - 16760 (-)
Type: TF
Location: 12633 - 16760 (-)
Gene ID: k141_76613_12
Type:
Location: 16880 - 17083 (-)
Type:
Location: 16880 - 17083 (-)
Gene ID: k141_76613_13
Type: TC
Location: 17228 - 20383 (+)
Type: TC
Location: 17228 - 20383 (+)
Gene ID: k141_76613_14
Type: pfam
Location: 20403 - 22046 (+)
Type: pfam
Location: 20403 - 22046 (+)
Gene ID: k141_76613_15
Type: pfam
Location: 22071 - 23468 (+)
Type: pfam
Location: 22071 - 23468 (+)
Gene ID: k141_76613_16
Type: CAZyme
Location: 23493 - 25622 (+)
Type: CAZyme
Location: 23493 - 25622 (+)
Gene ID: k141_76613_17
Type: CAZyme
Location: 25712 - 27346 (+)
Type: CAZyme
Location: 25712 - 27346 (+)
Gene ID: k141_76613_18
Type: CAZyme
Location: 27374 - 28999 (+)
Type: CAZyme
Location: 27374 - 28999 (+)
Gene ID: k141_76613_19
Type: TC
Location: 29019 - 30503 (+)
Type: TC
Location: 29019 - 30503 (+)
Gene ID: k141_76613_20
Type: CAZyme
Location: 30665 - 31795 (+)
Type: CAZyme
Location: 30665 - 31795 (+)
Gene ID: k141_76613_21
Type: CAZyme
Location: 31807 - 32784 (+)
Type: CAZyme
Location: 31807 - 32784 (+)
Gene ID: k141_76613_22
Type: CAZyme
Location: 32835 - 35396 (+)
Type: CAZyme
Location: 32835 - 35396 (+)
Gene ID: k141_76613_23
Type: CAZyme
Location: 35421 - 37475 (+)
Type: CAZyme
Location: 35421 - 37475 (+)
Gene ID: k141_76613_24
Type: pfam
Location: 37478 - 38677 (+)
Type: pfam
Location: 37478 - 38677 (+)
Gene ID: k141_76613_25
Type: TC
Location: 38793 - 40226 (+)
Type: TC
Location: 38793 - 40226 (+)
Gene ID: k141_76613_26
Type: CAZyme
Location: 40337 - 42754 (-)
Type: CAZyme
Location: 40337 - 42754 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_76613_21 | vegetarian > omnivore | 1.02852 | 0.01878 |