Cluster: CGMR002452_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: host glycan
- Genome ID: CGMR002452
- CGC Family ID: CGCFAM_00016
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_34238 | k141_34238_86 | 96945 | 100307 | + | 1.B.14.6.13 |
| TC | k141_34238 | k141_34238_87 | 100320 | 101936 | + | 8.A.46.2.2 |
| CAZyme | k141_34238 | k141_34238_88 | 101972 | 102970 | + | GH18 |
| pfam | k141_34238 | k141_34238_89 | 102999 | 104003 | + | F5_F8_type_C | BT_3987-like_N |
| pfam | k141_34238 | k141_34238_90 | 104017 | 105225 | + | BT_3987-like_N | Laminin_G_3 |
| CAZyme | k141_34238 | k141_34238_91 | 105367 | 107727 | + | GH3 |
Gene ID: k141_34238_86
Type: TC
Location: 96945 - 100307 (+)
Type: TC
Location: 96945 - 100307 (+)
Gene ID: k141_34238_87
Type: TC
Location: 100320 - 101936 (+)
Type: TC
Location: 100320 - 101936 (+)
Gene ID: k141_34238_88
Type: CAZyme
Location: 101972 - 102970 (+)
Type: CAZyme
Location: 101972 - 102970 (+)
Gene ID: k141_34238_89
Type: pfam
Location: 102999 - 104003 (+)
Type: pfam
Location: 102999 - 104003 (+)
Gene ID: k141_34238_90
Type: pfam
Location: 104017 - 105225 (+)
Type: pfam
Location: 104017 - 105225 (+)
Gene ID: k141_34238_91
Type: CAZyme
Location: 105367 - 107727 (+)
Type: CAZyme
Location: 105367 - 107727 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.