Cluster: CGMR002452_CGC55
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR002452
- CGC Family ID: CGCFAM_00667
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_130801 | k141_130801_65 | 69065 | 70399 | - | 3.A.1.11.2 |
| TC | k141_130801 | k141_130801_66 | 70406 | 71191 | - | 3.A.1.11.8 |
| TC | k141_130801 | k141_130801_67 | 71185 | 71979 | - | 3.A.1.11.8 |
| TC | k141_130801 | k141_130801_68 | 71991 | 73406 | - | 3.A.1.11.8 |
| pfam | k141_130801 | k141_130801_69 | 73516 | 74622 | + | Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_2 | Thioredoxin_8 | DUF4369 |
| CAZyme | k141_130801 | k141_130801_70 | 74923 | 77487 | - | GT35 |
| CAZyme | k141_130801 | k141_130801_71 | 77521 | 79182 | - | GT3 |
| TC | k141_130801 | k141_130801_72 | 79431 | 79895 | - | 3.A.2.2.2 |
| TC | k141_130801 | k141_130801_73 | 79939 | 81756 | - | 3.A.2.2.2 |
| pfam | k141_130801 | k141_130801_74 | 81753 | 82358 | - | ATP-synt_D |
| TC | k141_130801 | k141_130801_75 | 82372 | 83691 | - | 3.A.2.3.3 |
| TC | k141_130801 | k141_130801_76 | 83723 | 85483 | - | 3.A.2.3.3 |
Gene ID: k141_130801_65
Type: TC
Location: 69065 - 70399 (-)
Type: TC
Location: 69065 - 70399 (-)
Gene ID: k141_130801_66
Type: TC
Location: 70406 - 71191 (-)
Type: TC
Location: 70406 - 71191 (-)
Gene ID: k141_130801_67
Type: TC
Location: 71185 - 71979 (-)
Type: TC
Location: 71185 - 71979 (-)
Gene ID: k141_130801_68
Type: TC
Location: 71991 - 73406 (-)
Type: TC
Location: 71991 - 73406 (-)
Gene ID: k141_130801_69
Type: pfam
Location: 73516 - 74622 (+)
Type: pfam
Location: 73516 - 74622 (+)
Gene ID: k141_130801_70
Type: CAZyme
Location: 74923 - 77487 (-)
Type: CAZyme
Location: 74923 - 77487 (-)
Gene ID: k141_130801_71
Type: CAZyme
Location: 77521 - 79182 (-)
Type: CAZyme
Location: 77521 - 79182 (-)
Gene ID: k141_130801_72
Type: TC
Location: 79431 - 79895 (-)
Type: TC
Location: 79431 - 79895 (-)
Gene ID: k141_130801_73
Type: TC
Location: 79939 - 81756 (-)
Type: TC
Location: 79939 - 81756 (-)
Gene ID: k141_130801_74
Type: pfam
Location: 81753 - 82358 (-)
Type: pfam
Location: 81753 - 82358 (-)
Gene ID: k141_130801_75
Type: TC
Location: 82372 - 83691 (-)
Type: TC
Location: 82372 - 83691 (-)
Gene ID: k141_130801_76
Type: TC
Location: 83723 - 85483 (-)
Type: TC
Location: 83723 - 85483 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.