Cluster: CGMR002452_CGC54
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 6
- Substrate:
- Genome ID: CGMR002452
- CGC Family ID: CGCFAM_00018
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_130801 | k141_130801_32 | 32990 | 33598 | - | 9.B.18.1.2 |
| CAZyme | k141_130801 | k141_130801_33 | 33602 | 34807 | - | GT4 |
| NULL(UNKNOWN) | k141_130801 | k141_130801_34 | 34885 | 35970 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_130801 | k141_130801_35 | 35976 | 36932 | - | GT2 |
| CAZyme | k141_130801 | k141_130801_36 | 36939 | 38021 | - | GT4 |
| CAZyme | k141_130801 | k141_130801_37 | 38025 | 39167 | - | GT4 |
| pfam | k141_130801 | k141_130801_38 | 39253 | 40158 | - | ATPgrasp_TupA |
| NULL(UNKNOWN) | k141_130801 | k141_130801_39 | 40183 | 41424 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_130801 | k141_130801_40 | 41435 | 42463 | - | GT2 |
| TC | k141_130801 | k141_130801_41 | 42453 | 43892 | - | 2.A.66.2.2 |
| pfam | k141_130801 | k141_130801_42 | 43894 | 45054 | - | FAD_binding_2 | Amino_oxidase | GLF | NAD_binding_8 |
| CAZyme | k141_130801 | k141_130801_43 | 45054 | 46235 | - | GT4 |
| pfam | k141_130801 | k141_130801_44 | 46347 | 47507 | - | Epimerase_2 |
| pfam | k141_130801 | k141_130801_45 | 47513 | 48661 | - | Epimerase | Polysacc_synt_2 | NAD_binding_4 | Polysacc_synt_C |
| TC | k141_130801 | k141_130801_46 | 48666 | 49739 | - | 9.B.18.2.1 |
Gene ID: k141_130801_32
Type: TC
Location: 32990 - 33598 (-)
Type: TC
Location: 32990 - 33598 (-)
Gene ID: k141_130801_33
Type: CAZyme
Location: 33602 - 34807 (-)
Type: CAZyme
Location: 33602 - 34807 (-)
Gene ID: k141_130801_34
Type:
Location: 34885 - 35970 (-)
Type:
Location: 34885 - 35970 (-)
Gene ID: k141_130801_35
Type: CAZyme
Location: 35976 - 36932 (-)
Type: CAZyme
Location: 35976 - 36932 (-)
Gene ID: k141_130801_36
Type: CAZyme
Location: 36939 - 38021 (-)
Type: CAZyme
Location: 36939 - 38021 (-)
Gene ID: k141_130801_37
Type: CAZyme
Location: 38025 - 39167 (-)
Type: CAZyme
Location: 38025 - 39167 (-)
Gene ID: k141_130801_38
Type: pfam
Location: 39253 - 40158 (-)
Type: pfam
Location: 39253 - 40158 (-)
Gene ID: k141_130801_39
Type:
Location: 40183 - 41424 (-)
Type:
Location: 40183 - 41424 (-)
Gene ID: k141_130801_40
Type: CAZyme
Location: 41435 - 42463 (-)
Type: CAZyme
Location: 41435 - 42463 (-)
Gene ID: k141_130801_41
Type: TC
Location: 42453 - 43892 (-)
Type: TC
Location: 42453 - 43892 (-)
Gene ID: k141_130801_42
Type: pfam
Location: 43894 - 45054 (-)
Type: pfam
Location: 43894 - 45054 (-)
Gene ID: k141_130801_43
Type: CAZyme
Location: 45054 - 46235 (-)
Type: CAZyme
Location: 45054 - 46235 (-)
Gene ID: k141_130801_44
Type: pfam
Location: 46347 - 47507 (-)
Type: pfam
Location: 46347 - 47507 (-)
Gene ID: k141_130801_45
Type: pfam
Location: 47513 - 48661 (-)
Type: pfam
Location: 47513 - 48661 (-)
Gene ID: k141_130801_46
Type: TC
Location: 48666 - 49739 (-)
Type: TC
Location: 48666 - 49739 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.