Cluster: CGMR002452_CGC53
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate: host glycan
- Genome ID: CGMR002452
- CGC Family ID: CGCFAM_00016
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_12936 | k141_12936_16 | 20914 | 24258 | + | 1.B.14.6.13 |
| TC | k141_12936 | k141_12936_17 | 24277 | 25860 | + | 8.A.46.2.2 |
| pfam | k141_12936 | k141_12936_18 | 25892 | 26833 | + | GH18_BT1044-like |
| CAZyme | k141_12936 | k141_12936_19 | 26896 | 27831 | + | GH18 |
| CAZyme | k141_12936 | k141_12936_20 | 27941 | 29557 | + | GH18 |
| CAZyme | k141_12936 | k141_12936_21 | 29750 | 30685 | + | GH18 |
Gene ID: k141_12936_16
Type: TC
Location: 20914 - 24258 (+)
Type: TC
Location: 20914 - 24258 (+)
Gene ID: k141_12936_17
Type: TC
Location: 24277 - 25860 (+)
Type: TC
Location: 24277 - 25860 (+)
Gene ID: k141_12936_18
Type: pfam
Location: 25892 - 26833 (+)
Type: pfam
Location: 25892 - 26833 (+)
Gene ID: k141_12936_19
Type: CAZyme
Location: 26896 - 27831 (+)
Type: CAZyme
Location: 26896 - 27831 (+)
Gene ID: k141_12936_20
Type: CAZyme
Location: 27941 - 29557 (+)
Type: CAZyme
Location: 27941 - 29557 (+)
Gene ID: k141_12936_21
Type: CAZyme
Location: 29750 - 30685 (+)
Type: CAZyme
Location: 29750 - 30685 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.