Cluster: CGMR002452_CGC50
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR002452
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_38914 | k141_38914_92 | 114126 | 116009 | + | GH97 |
| CAZyme | k141_38914 | k141_38914_93 | 116326 | 118650 | + | GH92 |
| NULL(UNKNOWN) | k141_38914 | k141_38914_94 | 118647 | 121196 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_38914 | k141_38914_95 | 121224 | 124382 | + | 1.B.14.6.1 |
| pfam | k141_38914 | k141_38914_96 | 124407 | 126101 | + | SusD_RagB | SusD-like_3 |
| STP | k141_38914 | k141_38914_97 | 126139 | 127953 | + | Pyr_redox_2 |
| CAZyme | k141_38914 | k141_38914_98 | 127960 | 129165 | + | PL38 |
| TF | k141_38914 | k141_38914_99 | 129484 | 130506 | - | LacI |
| TC | k141_38914 | k141_38914_100 | 130734 | 132398 | + | 2.A.21.3.11 |
| pfam | k141_38914 | k141_38914_101 | 132422 | 134731 | + | FAD_binding_2 | DAO | FAD_oxidored | NAD_binding_8 |
| CAZyme | k141_38914 | k141_38914_102 | 134827 | 136416 | + | GH31_19 |
| pfam | k141_38914 | k141_38914_103 | 136552 | 137025 | - | NlpE |
| TC | k141_38914 | k141_38914_104 | 137062 | 138345 | - | 9.A.40.2.2 |
| TC | k141_38914 | k141_38914_105 | 138469 | 140844 | - | 1.B.14.6.5 |
| CAZyme | k141_38914 | k141_38914_106 | 140950 | 141762 | + | CE1 |
Gene ID: k141_38914_92
Type: CAZyme
Location: 114126 - 116009 (+)
Type: CAZyme
Location: 114126 - 116009 (+)
Gene ID: k141_38914_93
Type: CAZyme
Location: 116326 - 118650 (+)
Type: CAZyme
Location: 116326 - 118650 (+)
Gene ID: k141_38914_94
Type:
Location: 118647 - 121196 (+)
Type:
Location: 118647 - 121196 (+)
Gene ID: k141_38914_95
Type: TC
Location: 121224 - 124382 (+)
Type: TC
Location: 121224 - 124382 (+)
Gene ID: k141_38914_96
Type: pfam
Location: 124407 - 126101 (+)
Type: pfam
Location: 124407 - 126101 (+)
Gene ID: k141_38914_97
Type: STP
Location: 126139 - 127953 (+)
Type: STP
Location: 126139 - 127953 (+)
Gene ID: k141_38914_98
Type: CAZyme
Location: 127960 - 129165 (+)
Type: CAZyme
Location: 127960 - 129165 (+)
Gene ID: k141_38914_99
Type: TF
Location: 129484 - 130506 (-)
Type: TF
Location: 129484 - 130506 (-)
Gene ID: k141_38914_100
Type: TC
Location: 130734 - 132398 (+)
Type: TC
Location: 130734 - 132398 (+)
Gene ID: k141_38914_101
Type: pfam
Location: 132422 - 134731 (+)
Type: pfam
Location: 132422 - 134731 (+)
Gene ID: k141_38914_102
Type: CAZyme
Location: 134827 - 136416 (+)
Type: CAZyme
Location: 134827 - 136416 (+)
Gene ID: k141_38914_103
Type: pfam
Location: 136552 - 137025 (-)
Type: pfam
Location: 136552 - 137025 (-)
Gene ID: k141_38914_104
Type: TC
Location: 137062 - 138345 (-)
Type: TC
Location: 137062 - 138345 (-)
Gene ID: k141_38914_105
Type: TC
Location: 138469 - 140844 (-)
Type: TC
Location: 138469 - 140844 (-)
Gene ID: k141_38914_106
Type: CAZyme
Location: 140950 - 141762 (+)
Type: CAZyme
Location: 140950 - 141762 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.