Cluster: CGMR002452_CGC38
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 5
- Substrate: host glycan
- Genome ID: CGMR002452
- CGC Family ID: CGCFAM_00016
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_128903 | k141_128903_24 | 34239 | 35588 | + | 2.A.66.1.32 |
| TC | k141_128903 | k141_128903_25 | 35674 | 36843 | - | 2.A.1.7.16 |
| CAZyme | k141_128903 | k141_128903_26 | 36905 | 39310 | - | GH92 |
| sulfatase | k141_128903 | k141_128903_27 | 39334 | 40437 | - | S1_7 |
| NULL(UNKNOWN) | k141_128903 | k141_128903_28 | 40452 | 42176 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_128903 | k141_128903_29 | 42292 | 43593 | - | GH78 |
| CAZyme | k141_128903 | k141_128903_30 | 43606 | 45951 | - | GH3 |
| pfam | k141_128903 | k141_128903_31 | 46090 | 47250 | - | BT_3987-like_N | Laminin_G_3 |
| pfam | k141_128903 | k141_128903_32 | 47269 | 48267 | - | F5_F8_type_C | BT_3987-like_N | F5_F8_type_C_2 |
| CAZyme | k141_128903 | k141_128903_33 | 48295 | 49287 | - | GH18 |
| TC | k141_128903 | k141_128903_34 | 49324 | 50946 | - | 8.A.46.2.2 |
| TC | k141_128903 | k141_128903_35 | 50976 | 54098 | - | 1.B.14.6.13 |
| TF | k141_128903 | k141_128903_36 | 54404 | 55132 | + | GntR |
| CAZyme | k141_128903 | k141_128903_37 | 55136 | 56359 | + | GH117 |
Gene ID: k141_128903_24
Type: TC
Location: 34239 - 35588 (+)
Type: TC
Location: 34239 - 35588 (+)
Gene ID: k141_128903_25
Type: TC
Location: 35674 - 36843 (-)
Type: TC
Location: 35674 - 36843 (-)
Gene ID: k141_128903_26
Type: CAZyme
Location: 36905 - 39310 (-)
Type: CAZyme
Location: 36905 - 39310 (-)
Gene ID: k141_128903_27
Type: sulfatase
Location: 39334 - 40437 (-)
Type: sulfatase
Location: 39334 - 40437 (-)
Gene ID: k141_128903_28
Type:
Location: 40452 - 42176 (-)
Type:
Location: 40452 - 42176 (-)
Gene ID: k141_128903_29
Type: CAZyme
Location: 42292 - 43593 (-)
Type: CAZyme
Location: 42292 - 43593 (-)
Gene ID: k141_128903_30
Type: CAZyme
Location: 43606 - 45951 (-)
Type: CAZyme
Location: 43606 - 45951 (-)
Gene ID: k141_128903_31
Type: pfam
Location: 46090 - 47250 (-)
Type: pfam
Location: 46090 - 47250 (-)
Gene ID: k141_128903_32
Type: pfam
Location: 47269 - 48267 (-)
Type: pfam
Location: 47269 - 48267 (-)
Gene ID: k141_128903_33
Type: CAZyme
Location: 48295 - 49287 (-)
Type: CAZyme
Location: 48295 - 49287 (-)
Gene ID: k141_128903_34
Type: TC
Location: 49324 - 50946 (-)
Type: TC
Location: 49324 - 50946 (-)
Gene ID: k141_128903_35
Type: TC
Location: 50976 - 54098 (-)
Type: TC
Location: 50976 - 54098 (-)
Gene ID: k141_128903_36
Type: TF
Location: 54404 - 55132 (+)
Type: TF
Location: 54404 - 55132 (+)
Gene ID: k141_128903_37
Type: CAZyme
Location: 55136 - 56359 (+)
Type: CAZyme
Location: 55136 - 56359 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.