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Cluster: CGMR002452_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_160587 k141_160587_176 185820 186917 - GH18
TC k141_160587 k141_160587_177 186937 188478 - 8.A.46.2.1
TC k141_160587 k141_160587_178 188493 191246 - 1.B.14.6.13
pfam k141_160587 k141_160587_179 191556 192575 - F5_F8_type_C | BT_3987-like_N
pfam k141_160587 k141_160587_180 192601 193782 - BT_3987-like_N | Laminin_G_3
CAZyme k141_160587 k141_160587_181 193787 194878 - GH18
TC k141_160587 k141_160587_182 194910 196475 - 8.A.46.2.2
TC k141_160587 k141_160587_183 196487 199792 - 1.B.14.6.13
NULL(UNKNOWN) k141_160587 k141_160587_184 200054 200167 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_160587 k141_160587_185 200302 201534 + Phage_integrase | Phage_int_SAM_5 | Arm-DNA-bind_5
TC k141_160587 k141_160587_186 202157 205048 + 1.B.14.6.13
TC k141_160587 k141_160587_187 205061 206605 + 8.A.46.2.1
CAZyme k141_160587 k141_160587_188 206632 207738 + GH18
pfam k141_160587 k141_160587_189 207760 208890 + BT_3987-like_N | Laminin_G_3
pfam k141_160587 k141_160587_190 208903 209934 + F5_F8_type_C | DUF4989 | DUF4999 | F5_F8_type_C_2
CAZyme k141_160587 k141_160587_191 210204 212402 + GH163
pfam k141_160587 k141_160587_192 212493 213800 + MFS_1 | MFS_1
CAZyme k141_160587 k141_160587_193 213861 214838 + GH130_2
CAZyme k141_160587 k141_160587_194 214875 217124 + GH92
sulfatase k141_160587 k141_160587_195 217345 218805 + S1_28
sulfatase k141_160587 k141_160587_196 218829 220409 + S1_11
CAZyme k141_160587 k141_160587_197 220427 222715 + GH20
Gene ID: k141_160587_176
Type: CAZyme
Location: 185820 - 186917 (-)
Gene ID: k141_160587_177
Type: TC
Location: 186937 - 188478 (-)
Gene ID: k141_160587_178
Type: TC
Location: 188493 - 191246 (-)
Gene ID: k141_160587_179
Type: pfam
Location: 191556 - 192575 (-)
Gene ID: k141_160587_180
Type: pfam
Location: 192601 - 193782 (-)
Gene ID: k141_160587_181
Type: CAZyme
Location: 193787 - 194878 (-)
Gene ID: k141_160587_182
Type: TC
Location: 194910 - 196475 (-)
Gene ID: k141_160587_183
Type: TC
Location: 196487 - 199792 (-)
Gene ID: k141_160587_184
Type:
Location: 200054 - 200167 (+)
Gene ID: k141_160587_185
Type: pfam
Location: 200302 - 201534 (+)
Gene ID: k141_160587_186
Type: TC
Location: 202157 - 205048 (+)
Gene ID: k141_160587_187
Type: TC
Location: 205061 - 206605 (+)
Gene ID: k141_160587_188
Type: CAZyme
Location: 206632 - 207738 (+)
Gene ID: k141_160587_189
Type: pfam
Location: 207760 - 208890 (+)
Gene ID: k141_160587_190
Type: pfam
Location: 208903 - 209934 (+)
Gene ID: k141_160587_191
Type: CAZyme
Location: 210204 - 212402 (+)
Gene ID: k141_160587_192
Type: pfam
Location: 212493 - 213800 (+)
Gene ID: k141_160587_193
Type: CAZyme
Location: 213861 - 214838 (+)
Gene ID: k141_160587_194
Type: CAZyme
Location: 214875 - 217124 (+)
Gene ID: k141_160587_195
Type: sulfatase
Location: 217345 - 218805 (+)
Gene ID: k141_160587_196
Type: sulfatase
Location: 218829 - 220409 (+)
Gene ID: k141_160587_197
Type: CAZyme
Location: 220427 - 222715 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_160587_193 vegan > omnivore 1.20651 0.02236

🧭 Explore Read Mapping of CGC

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