Cluster: CGMR002452_CGC24
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: fructan
- Genome ID: CGMR002452
- CGC Family ID: CGCFAM_00017
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_30711 | k141_30711_36 | 48348 | 49511 | - | 2.A.1.7.17 |
| CAZyme | k141_30711 | k141_30711_37 | 49522 | 51336 | - | GH32 |
| TC | k141_30711 | k141_30711_38 | 51616 | 54723 | + | 1.B.14.6.1 |
| pfam | k141_30711 | k141_30711_39 | 54737 | 56452 | + | SusD_RagB | SusD-like_3 |
| pfam | k141_30711 | k141_30711_40 | 56480 | 57892 | + | DUF4960 |
| CAZyme | k141_30711 | k141_30711_41 | 57909 | 59441 | + | GH32 |
Gene ID: k141_30711_36
Type: TC
Location: 48348 - 49511 (-)
Type: TC
Location: 48348 - 49511 (-)
Gene ID: k141_30711_37
Type: CAZyme
Location: 49522 - 51336 (-)
Type: CAZyme
Location: 49522 - 51336 (-)
Gene ID: k141_30711_38
Type: TC
Location: 51616 - 54723 (+)
Type: TC
Location: 51616 - 54723 (+)
Gene ID: k141_30711_39
Type: pfam
Location: 54737 - 56452 (+)
Type: pfam
Location: 54737 - 56452 (+)
Gene ID: k141_30711_40
Type: pfam
Location: 56480 - 57892 (+)
Type: pfam
Location: 56480 - 57892 (+)
Gene ID: k141_30711_41
Type: CAZyme
Location: 57909 - 59441 (+)
Type: CAZyme
Location: 57909 - 59441 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_30711_36 | vegetarian > vegan | 1.20143 | 0.01057 |