Cluster: CGMR002452_CGC17
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 6
- Substrate:
- Genome ID: CGMR002452
- CGC Family ID: CGCFAM_00985
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_141920 | k141_141920_38 | 40551 | 42167 | - | 3.A.1.121.4 |
| TC | k141_141920 | k141_141920_39 | 42362 | 42988 | + | 3.A.8.1.1 |
| pfam | k141_141920 | k141_141920_40 | 43045 | 44217 | + | DnaJ | DnaJ_CXXCXGXG | DnaJ_C |
| NULL(UNKNOWN) | k141_141920 | k141_141920_41 | 44444 | 49906 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_141920 | k141_141920_42 | 50186 | 52690 | - | GH2 |
| CAZyme | k141_141920 | k141_141920_43 | 52711 | 54777 | - | GH20 |
| pfam | k141_141920 | k141_141920_44 | 54795 | 56015 | - | NANM | NANM |
| CAZyme | k141_141920 | k141_141920_45 | 56027 | 58354 | - | GH20 |
| CAZyme | k141_141920 | k141_141920_46 | 58394 | 60463 | - | CE20 |
| sulfatase | k141_141920 | k141_141920_47 | 60460 | 61125 | - | S1_16 |
| CAZyme | k141_141920 | k141_141920_48 | 61146 | 63155 | - | GH20 |
| CAZyme | k141_141920 | k141_141920_49 | 63189 | 64823 | - | CBM93 | GH33 |
| TC | k141_141920 | k141_141920_50 | 65000 | 66235 | - | 2.A.1.14.14 |
Gene ID: k141_141920_38
Type: TC
Location: 40551 - 42167 (-)
Type: TC
Location: 40551 - 42167 (-)
Gene ID: k141_141920_39
Type: TC
Location: 42362 - 42988 (+)
Type: TC
Location: 42362 - 42988 (+)
Gene ID: k141_141920_40
Type: pfam
Location: 43045 - 44217 (+)
Type: pfam
Location: 43045 - 44217 (+)
Gene ID: k141_141920_41
Type:
Location: 44444 - 49906 (-)
Type:
Location: 44444 - 49906 (-)
Gene ID: k141_141920_42
Type: CAZyme
Location: 50186 - 52690 (-)
Type: CAZyme
Location: 50186 - 52690 (-)
Gene ID: k141_141920_43
Type: CAZyme
Location: 52711 - 54777 (-)
Type: CAZyme
Location: 52711 - 54777 (-)
Gene ID: k141_141920_44
Type: pfam
Location: 54795 - 56015 (-)
Type: pfam
Location: 54795 - 56015 (-)
Gene ID: k141_141920_45
Type: CAZyme
Location: 56027 - 58354 (-)
Type: CAZyme
Location: 56027 - 58354 (-)
Gene ID: k141_141920_46
Type: CAZyme
Location: 58394 - 60463 (-)
Type: CAZyme
Location: 58394 - 60463 (-)
Gene ID: k141_141920_47
Type: sulfatase
Location: 60460 - 61125 (-)
Type: sulfatase
Location: 60460 - 61125 (-)
Gene ID: k141_141920_48
Type: CAZyme
Location: 61146 - 63155 (-)
Type: CAZyme
Location: 61146 - 63155 (-)
Gene ID: k141_141920_49
Type: CAZyme
Location: 63189 - 64823 (-)
Type: CAZyme
Location: 63189 - 64823 (-)
Gene ID: k141_141920_50
Type: TC
Location: 65000 - 66235 (-)
Type: TC
Location: 65000 - 66235 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.