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Cluster: CGMR002452_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_137029 k141_137029_1 3 1874 - 1.A.23.1.4
TC k141_137029 k141_137029_2 1947 2906 + 2.A.19.5.2
pfam k141_137029 k141_137029_3 3031 5508 - Metallophos | PQQ | PQQ | PQQ_2 | PQQ_2 | Beta-prop_ACSF4 | Beta-prop_ACSF4 | Beta-prop_ACSF4 | MetallophosN
TC k141_137029 k141_137029_4 5530 6936 - 2.A.2.3.6
CAZyme k141_137029 k141_137029_5 6956 8143 - GH130_1
pfam k141_137029 k141_137029_6 8309 9475 - T2SS-T3SS_pil_N
CAZyme k141_137029 k141_137029_7 9546 11108 - GH30_6
TC k141_137029 k141_137029_8 11139 12770 - 8.A.46.1.3
TC k141_137029 k141_137029_9 12806 15871 - 1.B.14.6.1
Gene ID: k141_137029_1
Type: TC
Location: 3 - 1874 (-)
Gene ID: k141_137029_2
Type: TC
Location: 1947 - 2906 (+)
Gene ID: k141_137029_3
Type: pfam
Location: 3031 - 5508 (-)
Gene ID: k141_137029_4
Type: TC
Location: 5530 - 6936 (-)
Gene ID: k141_137029_5
Type: CAZyme
Location: 6956 - 8143 (-)
Gene ID: k141_137029_6
Type: pfam
Location: 8309 - 9475 (-)
Gene ID: k141_137029_7
Type: CAZyme
Location: 9546 - 11108 (-)
Gene ID: k141_137029_8
Type: TC
Location: 11139 - 12770 (-)
Gene ID: k141_137029_9
Type: TC
Location: 12806 - 15871 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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