Cluster: CGMR002392_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR002392
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_52943 | k141_52943_8 | 7854 | 9089 | - | GH105 |
| pfam | k141_52943 | k141_52943_9 | 9196 | 9864 | - | Lipase_GDSL | Lipase_GDSL_2 |
| CAZyme | k141_52943 | k141_52943_10 | 9934 | 12099 | - | CE19 | CE8 |
| CAZyme | k141_52943 | k141_52943_11 | 12231 | 13826 | - | GH28 |
| TC | k141_52943 | k141_52943_12 | 13941 | 15500 | - | 2.A.2.5.1 |
Gene ID: k141_52943_8
Type: CAZyme
Location: 7854 - 9089 (-)
Type: CAZyme
Location: 7854 - 9089 (-)
Gene ID: k141_52943_9
Type: pfam
Location: 9196 - 9864 (-)
Type: pfam
Location: 9196 - 9864 (-)
Gene ID: k141_52943_10
Type: CAZyme
Location: 9934 - 12099 (-)
Type: CAZyme
Location: 9934 - 12099 (-)
Gene ID: k141_52943_11
Type: CAZyme
Location: 12231 - 13826 (-)
Type: CAZyme
Location: 12231 - 13826 (-)
Gene ID: k141_52943_12
Type: TC
Location: 13941 - 15500 (-)
Type: TC
Location: 13941 - 15500 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_AW
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_52943_8 | vegan > omnivore | 1.02508 | 0.02258 |