Cluster: CGMR002392_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR002392
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_96347 | k141_96347_2 | 398 | 1417 | + | 9.B.146.1.6 |
| pfam | k141_96347 | k141_96347_3 | 1427 | 2833 | + | Mur_ligase_C | Mur_ligase_M |
| TC | k141_96347 | k141_96347_4 | 2870 | 4363 | + | 2.A.103.1.1 |
| CAZyme | k141_96347 | k141_96347_5 | 4353 | 5468 | + | GT28 |
Gene ID: k141_96347_2
Type: TC
Location: 398 - 1417 (+)
Type: TC
Location: 398 - 1417 (+)
Gene ID: k141_96347_3
Type: pfam
Location: 1427 - 2833 (+)
Type: pfam
Location: 1427 - 2833 (+)
Gene ID: k141_96347_4
Type: TC
Location: 2870 - 4363 (+)
Type: TC
Location: 2870 - 4363 (+)
Gene ID: k141_96347_5
Type: CAZyme
Location: 4353 - 5468 (+)
Type: CAZyme
Location: 4353 - 5468 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_AW
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.