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Cluster: CGMR002392_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_38374 k141_38374_12 10712 12406 + 4.A.3.1.1
STP k141_38374 k141_38374_13 12569 12964 + DeoRC
pfam k141_38374 k141_38374_14 13176 14408 - Fic
CAZyme k141_38374 k141_38374_15 14860 16281 - GH1
TC k141_38374 k141_38374_16 16358 18136 - 4.A.3.1.1
TF k141_38374 k141_38374_17 18412 19422 + LacI
CAZyme k141_38374 k141_38374_18 19757 21196 - GH1
TC k141_38374 k141_38374_19 21263 23038 - 4.A.3.1.1
TF k141_38374 k141_38374_20 23396 24400 + LacI
TC k141_38374 k141_38374_21 24615 24953 + 4.A.3.1.2
Gene ID: k141_38374_12
Type: TC
Location: 10712 - 12406 (+)
Gene ID: k141_38374_13
Type: STP
Location: 12569 - 12964 (+)
Gene ID: k141_38374_14
Type: pfam
Location: 13176 - 14408 (-)
Gene ID: k141_38374_15
Type: CAZyme
Location: 14860 - 16281 (-)
Gene ID: k141_38374_16
Type: TC
Location: 16358 - 18136 (-)
Gene ID: k141_38374_17
Type: TF
Location: 18412 - 19422 (+)
Gene ID: k141_38374_18
Type: CAZyme
Location: 19757 - 21196 (-)
Gene ID: k141_38374_19
Type: TC
Location: 21263 - 23038 (-)
Gene ID: k141_38374_20
Type: TF
Location: 23396 - 24400 (+)
Gene ID: k141_38374_21
Type: TC
Location: 24615 - 24953 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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