Cluster: CGMR002392_CGC12
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR002392
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_6799 | k141_6799_24 | 20556 | 22061 | + | GH77 |
| CAZyme | k141_6799 | k141_6799_25 | 22190 | 24457 | + | GT35 |
| TC | k141_6799 | k141_6799_26 | 24754 | 25953 | - | 3.A.1.1.22 |
| TC | k141_6799 | k141_6799_27 | 26022 | 26861 | - | 3.A.1.1.45 |
| TC | k141_6799 | k141_6799_28 | 26861 | 27715 | - | 3.A.1.1.45 |
| TC | k141_6799 | k141_6799_29 | 27803 | 29119 | - | 3.A.1.1.45 |
| TF | k141_6799 | k141_6799_30 | 29426 | 30145 | - | GntR |
| TC | k141_6799 | k141_6799_31 | 30408 | 32825 | + | 4.A.1.1.8 |
Gene ID: k141_6799_24
Type: CAZyme
Location: 20556 - 22061 (+)
Type: CAZyme
Location: 20556 - 22061 (+)
Gene ID: k141_6799_25
Type: CAZyme
Location: 22190 - 24457 (+)
Type: CAZyme
Location: 22190 - 24457 (+)
Gene ID: k141_6799_26
Type: TC
Location: 24754 - 25953 (-)
Type: TC
Location: 24754 - 25953 (-)
Gene ID: k141_6799_27
Type: TC
Location: 26022 - 26861 (-)
Type: TC
Location: 26022 - 26861 (-)
Gene ID: k141_6799_28
Type: TC
Location: 26861 - 27715 (-)
Type: TC
Location: 26861 - 27715 (-)
Gene ID: k141_6799_29
Type: TC
Location: 27803 - 29119 (-)
Type: TC
Location: 27803 - 29119 (-)
Gene ID: k141_6799_30
Type: TF
Location: 29426 - 30145 (-)
Type: TF
Location: 29426 - 30145 (-)
Gene ID: k141_6799_31
Type: TC
Location: 30408 - 32825 (+)
Type: TC
Location: 30408 - 32825 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_AW
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.