Cluster: CGMR002392_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR002392
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_107816 | k141_107816_10 | 11813 | 13030 | - | GT4 |
| STP | k141_107816 | k141_107816_11 | 13023 | 14228 | - | Fer4 | Fer4 |
| pfam | k141_107816 | k141_107816_12 | 14240 | 15358 | - | PS_pyruv_trans |
| CAZyme | k141_107816 | k141_107816_13 | 15358 | 16467 | - | GT4 |
| TC | k141_107816 | k141_107816_14 | 16468 | 17217 | - | 9.B.18.1.2 |
Gene ID: k141_107816_10
Type: CAZyme
Location: 11813 - 13030 (-)
Type: CAZyme
Location: 11813 - 13030 (-)
Gene ID: k141_107816_11
Type: STP
Location: 13023 - 14228 (-)
Type: STP
Location: 13023 - 14228 (-)
Gene ID: k141_107816_12
Type: pfam
Location: 14240 - 15358 (-)
Type: pfam
Location: 14240 - 15358 (-)
Gene ID: k141_107816_13
Type: CAZyme
Location: 15358 - 16467 (-)
Type: CAZyme
Location: 15358 - 16467 (-)
Gene ID: k141_107816_14
Type: TC
Location: 16468 - 17217 (-)
Type: TC
Location: 16468 - 17217 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_AW
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.