Cluster: CGMR002392_CGC1
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR002392
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_96219 | k141_96219_1 | 219 | 1952 | - | GH13_30 |
| STP | k141_96219 | k141_96219_2 | 2538 | 3284 | - | STAS |
| STP | k141_96219 | k141_96219_3 | 3363 | 5708 | - | GAF | SpoIIE |
| TC | k141_96219 | k141_96219_4 | 6455 | 7483 | - | 3.A.1.5.36 |
| TC | k141_96219 | k141_96219_5 | 7483 | 8574 | - | 3.A.1.5.34 |
| TC | k141_96219 | k141_96219_6 | 8577 | 9512 | - | 3.A.1.5.11 |
| TC | k141_96219 | k141_96219_7 | 9527 | 10564 | - | 3.A.1.5.37 |
| TC | k141_96219 | k141_96219_8 | 10721 | 12397 | - | 3.A.1.5.35 |
Gene ID: k141_96219_1
Type: CAZyme
Location: 219 - 1952 (-)
Type: CAZyme
Location: 219 - 1952 (-)
Gene ID: k141_96219_2
Type: STP
Location: 2538 - 3284 (-)
Type: STP
Location: 2538 - 3284 (-)
Gene ID: k141_96219_3
Type: STP
Location: 3363 - 5708 (-)
Type: STP
Location: 3363 - 5708 (-)
Gene ID: k141_96219_4
Type: TC
Location: 6455 - 7483 (-)
Type: TC
Location: 6455 - 7483 (-)
Gene ID: k141_96219_5
Type: TC
Location: 7483 - 8574 (-)
Type: TC
Location: 7483 - 8574 (-)
Gene ID: k141_96219_6
Type: TC
Location: 8577 - 9512 (-)
Type: TC
Location: 8577 - 9512 (-)
Gene ID: k141_96219_7
Type: TC
Location: 9527 - 10564 (-)
Type: TC
Location: 9527 - 10564 (-)
Gene ID: k141_96219_8
Type: TC
Location: 10721 - 12397 (-)
Type: TC
Location: 10721 - 12397 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_AW
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.