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Cluster: CGMR002085_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_15748 k141_15748_4 1455 2801 - 1.B.17.3.7
TC k141_15748 k141_15748_5 2803 4731 - 3.A.1.122.12
TC k141_15748 k141_15748_6 4732 5928 - 3.A.1.122.1
pfam k141_15748 k141_15748_7 5982 8015 - UvrD-helicase | AAA_19 | UvrD_C | UvrD_C_2
CAZyme k141_15748 k141_15748_8 8081 10249 + GT51
peptidase k141_15748 k141_15748_9 10251 15374 + I39.UPW
pfam k141_15748 k141_15748_10 15496 18120 + tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | Val_tRNA-synt_C | tRNA-synt_1_2
TC k141_15748 k141_15748_11 18120 19076 + 3.A.1.24.2
TC k141_15748 k141_15748_12 19076 19750 + 3.A.1.24.5
TC k141_15748 k141_15748_13 20010 20792 + 3.A.1.24.5
TC k141_15748 k141_15748_14 20864 21643 + 3.A.1.24.5
pfam k141_15748 k141_15748_15 21802 22392 + VTT_dom
pfam k141_15748 k141_15748_16 22463 23251 - Asp_Glu_race
TC k141_15748 k141_15748_17 23343 24503 + 2.A.103.1.1
CAZyme k141_15748 k141_15748_18 24500 25522 + GT28
Gene ID: k141_15748_4
Type: TC
Location: 1455 - 2801 (-)
Gene ID: k141_15748_5
Type: TC
Location: 2803 - 4731 (-)
Gene ID: k141_15748_6
Type: TC
Location: 4732 - 5928 (-)
Gene ID: k141_15748_7
Type: pfam
Location: 5982 - 8015 (-)
Gene ID: k141_15748_8
Type: CAZyme
Location: 8081 - 10249 (+)
Gene ID: k141_15748_9
Type: peptidase
Location: 10251 - 15374 (+)
Gene ID: k141_15748_10
Type: pfam
Location: 15496 - 18120 (+)
Gene ID: k141_15748_11
Type: TC
Location: 18120 - 19076 (+)
Gene ID: k141_15748_12
Type: TC
Location: 19076 - 19750 (+)
Gene ID: k141_15748_13
Type: TC
Location: 20010 - 20792 (+)
Gene ID: k141_15748_14
Type: TC
Location: 20864 - 21643 (+)
Gene ID: k141_15748_15
Type: pfam
Location: 21802 - 22392 (+)
Gene ID: k141_15748_16
Type: pfam
Location: 22463 - 23251 (-)
Gene ID: k141_15748_17
Type: TC
Location: 23343 - 24503 (+)
Gene ID: k141_15748_18
Type: CAZyme
Location: 24500 - 25522 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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