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Cluster: CGMR002085_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_29858 k141_29858_29 28608 29600 + 2.A.56.1.1
pfam k141_29858 k141_29858_30 29600 30142 + DctQ
TC k141_29858 k141_29858_31 30154 31437 + 2.A.56.1.1
TC k141_29858 k141_29858_32 31463 32512 - 9.B.34.1.3
TC k141_29858 k141_29858_33 32505 33599 - 9.B.34.1.2
NULL(UNKNOWN) k141_29858 k141_29858_34 33645 33803 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_29858 k141_29858_35 33814 35658 - 1.A.23.4.10
TC k141_29858 k141_29858_36 35651 36295 - 2.A.53.3.12
TC k141_29858 k141_29858_37 36469 37167 + 1.A.14.3.3
pfam k141_29858 k141_29858_38 37160 37543 + ThiD2
pfam k141_29858 k141_29858_39 37606 37935 + SecG
CAZyme k141_29858 k141_29858_40 37938 38897 + CE4
Gene ID: k141_29858_29
Type: TC
Location: 28608 - 29600 (+)
Gene ID: k141_29858_30
Type: pfam
Location: 29600 - 30142 (+)
Gene ID: k141_29858_31
Type: TC
Location: 30154 - 31437 (+)
Gene ID: k141_29858_32
Type: TC
Location: 31463 - 32512 (-)
Gene ID: k141_29858_33
Type: TC
Location: 32505 - 33599 (-)
Gene ID: k141_29858_34
Type:
Location: 33645 - 33803 (-)
Gene ID: k141_29858_35
Type: TC
Location: 33814 - 35658 (-)
Gene ID: k141_29858_36
Type: TC
Location: 35651 - 36295 (-)
Gene ID: k141_29858_37
Type: TC
Location: 36469 - 37167 (+)
Gene ID: k141_29858_38
Type: pfam
Location: 37160 - 37543 (+)
Gene ID: k141_29858_39
Type: pfam
Location: 37606 - 37935 (+)
Gene ID: k141_29858_40
Type: CAZyme
Location: 37938 - 38897 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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