Cluster: CGMR002085_CGC1
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 8
- Substrate:
- Genome ID: CGMR002085
- CGC Family ID: CGCFAM_00076
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_396 | k141_396_33 | 35634 | 37415 | - | 9.B.18.2.1 |
| pfam | k141_396 | k141_396_34 | 37416 | 38507 | - | Aminotran_5 | DegT_DnrJ_EryC1 | Beta_elim_lyase |
| pfam | k141_396 | k141_396_35 | 38557 | 39147 | - | Hexapep | Hexapep | PglD_N |
| TC | k141_396 | k141_396_36 | 39134 | 39739 | - | 9.B.18.1.2 |
| CAZyme | k141_396 | k141_396_37 | 39732 | 40847 | - | GT4 |
| CAZyme | k141_396 | k141_396_38 | 40850 | 42949 | - | GT66 |
| CAZyme | k141_396 | k141_396_39 | 42942 | 44066 | - | GT4 |
| CAZyme | k141_396 | k141_396_40 | 44063 | 45106 | - | GT4 |
| CAZyme | k141_396 | k141_396_41 | 45103 | 46161 | - | GT4 |
| CAZyme | k141_396 | k141_396_42 | 46158 | 47090 | - | GT2 |
| CAZyme | k141_396 | k141_396_43 | 47091 | 47852 | - | GT25 |
| NULL(UNKNOWN) | k141_396 | k141_396_44 | 47853 | 49370 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_396 | k141_396_45 | 49370 | 51499 | - | GT66 |
Gene ID: k141_396_33
Type: TC
Location: 35634 - 37415 (-)
Type: TC
Location: 35634 - 37415 (-)
Gene ID: k141_396_34
Type: pfam
Location: 37416 - 38507 (-)
Type: pfam
Location: 37416 - 38507 (-)
Gene ID: k141_396_35
Type: pfam
Location: 38557 - 39147 (-)
Type: pfam
Location: 38557 - 39147 (-)
Gene ID: k141_396_36
Type: TC
Location: 39134 - 39739 (-)
Type: TC
Location: 39134 - 39739 (-)
Gene ID: k141_396_37
Type: CAZyme
Location: 39732 - 40847 (-)
Type: CAZyme
Location: 39732 - 40847 (-)
Gene ID: k141_396_38
Type: CAZyme
Location: 40850 - 42949 (-)
Type: CAZyme
Location: 40850 - 42949 (-)
Gene ID: k141_396_39
Type: CAZyme
Location: 42942 - 44066 (-)
Type: CAZyme
Location: 42942 - 44066 (-)
Gene ID: k141_396_40
Type: CAZyme
Location: 44063 - 45106 (-)
Type: CAZyme
Location: 44063 - 45106 (-)
Gene ID: k141_396_41
Type: CAZyme
Location: 45103 - 46161 (-)
Type: CAZyme
Location: 45103 - 46161 (-)
Gene ID: k141_396_42
Type: CAZyme
Location: 46158 - 47090 (-)
Type: CAZyme
Location: 46158 - 47090 (-)
Gene ID: k141_396_43
Type: CAZyme
Location: 47091 - 47852 (-)
Type: CAZyme
Location: 47091 - 47852 (-)
Gene ID: k141_396_44
Type:
Location: 47853 - 49370 (-)
Type:
Location: 47853 - 49370 (-)
Gene ID: k141_396_45
Type: CAZyme
Location: 49370 - 51499 (-)
Type: CAZyme
Location: 49370 - 51499 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Campylobacteraceae
Genus
Campylobacter_A
Species
Campylobacter_A concisus_AB
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.