dbCAN Logo

Cluster: CGMR002033_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_7973 k141_7973_4 5235 6680 - 2.A.66.2.16
pfam k141_7973 k141_7973_5 6700 7467 - Radical_SAM | Fer4_12
pfam k141_7973 k141_7973_6 7467 9425 - Gly_radical | PFL-like | YjjI-like
CAZyme k141_7973 k141_7973_7 9480 10373 - GT2
CAZyme k141_7973 k141_7973_8 10393 11451 - GT113
CAZyme k141_7973 k141_7973_9 11459 12562 - GT4
CAZyme k141_7973 k141_7973_10 12568 13602 - GT2
NULL(UNKNOWN) k141_7973 k141_7973_11 13620 14921 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_7973 k141_7973_12 14931 15752 - GT111
TC k141_7973 k141_7973_13 15776 17203 - 9.B.18.1.2
Gene ID: k141_7973_4
Type: TC
Location: 5235 - 6680 (-)
Gene ID: k141_7973_5
Type: pfam
Location: 6700 - 7467 (-)
Gene ID: k141_7973_6
Type: pfam
Location: 7467 - 9425 (-)
Gene ID: k141_7973_7
Type: CAZyme
Location: 9480 - 10373 (-)
Gene ID: k141_7973_8
Type: CAZyme
Location: 10393 - 11451 (-)
Gene ID: k141_7973_9
Type: CAZyme
Location: 11459 - 12562 (-)
Gene ID: k141_7973_10
Type: CAZyme
Location: 12568 - 13602 (-)
Gene ID: k141_7973_11
Type:
Location: 13620 - 14921 (-)
Gene ID: k141_7973_12
Type: CAZyme
Location: 14931 - 15752 (-)
Gene ID: k141_7973_13
Type: TC
Location: 15776 - 17203 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_7973_13 vegan > omnivore 1.11353 0.04014

🧭 Explore Read Mapping of CGC

← Back to Cluster List