Cluster: CGMR002033_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR002033
- CGC Family ID: CGCFAM_00005
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_43364 | k141_43364_3 | 1479 | 2171 | + | 9.B.18.1.3 |
| CAZyme | k141_43364 | k141_43364_4 | 2180 | 2950 | + | GT2 |
| CAZyme | k141_43364 | k141_43364_5 | 2934 | 3983 | + | GT4 |
| CAZyme | k141_43364 | k141_43364_6 | 3996 | 5114 | + | GT4 |
| pfam | k141_43364 | k141_43364_7 | 5142 | 6224 | + | EpsG |
| CAZyme | k141_43364 | k141_43364_8 | 6258 | 7385 | + | GT4 |
Gene ID: k141_43364_3
Type: TC
Location: 1479 - 2171 (+)
Type: TC
Location: 1479 - 2171 (+)
Gene ID: k141_43364_4
Type: CAZyme
Location: 2180 - 2950 (+)
Type: CAZyme
Location: 2180 - 2950 (+)
Gene ID: k141_43364_5
Type: CAZyme
Location: 2934 - 3983 (+)
Type: CAZyme
Location: 2934 - 3983 (+)
Gene ID: k141_43364_6
Type: CAZyme
Location: 3996 - 5114 (+)
Type: CAZyme
Location: 3996 - 5114 (+)
Gene ID: k141_43364_7
Type: pfam
Location: 5142 - 6224 (+)
Type: pfam
Location: 5142 - 6224 (+)
Gene ID: k141_43364_8
Type: CAZyme
Location: 6258 - 7385 (+)
Type: CAZyme
Location: 6258 - 7385 (+)
Taxonomic Lineage
Domain
Archaea
Phylum
Methanobacteriota
Class
Methanobacteria
Order
Methanobacteriales
Family
Methanobacteriaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.