Cluster: CGMR002033_CGC14
🧬 Cluster Details
- Gene Count: 20
- CAZyme Count: 14
- Substrate:
- Genome ID: CGMR002033
- CGC Family ID: CGCFAM_00549
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_158959 | k141_158959_20 | 24811 | 26214 | - | 9.B.18.1.1 |
| CAZyme | k141_158959 | k141_158959_21 | 26269 | 27129 | - | GT2 |
| CAZyme | k141_158959 | k141_158959_22 | 27139 | 28113 | - | GT2 |
| CAZyme | k141_158959 | k141_158959_23 | 28114 | 29133 | - | GT2 |
| pfam | k141_158959 | k141_158959_24 | 29138 | 30205 | - | Glyphos_transf |
| TC | k141_158959 | k141_158959_25 | 30207 | 31973 | - | 3.A.1.103.1 |
| TC | k141_158959 | k141_158959_26 | 31986 | 32771 | - | 3.A.1.103.5 |
| CAZyme | k141_158959 | k141_158959_27 | 32844 | 33875 | - | GT2 |
| CAZyme | k141_158959 | k141_158959_28 | 33881 | 34936 | - | GT2 |
| CAZyme | k141_158959 | k141_158959_29 | 34933 | 36561 | - | GT4 |
| CAZyme | k141_158959 | k141_158959_30 | 36570 | 38228 | - | GT2 |
| CAZyme | k141_158959 | k141_158959_31 | 38228 | 39274 | - | GT116 |
| NULL(UNKNOWN) | k141_158959 | k141_158959_32 | 39438 | 39707 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_158959 | k141_158959_33 | 39728 | 40021 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_158959 | k141_158959_34 | 40259 | 41803 | - | GT4 |
| CAZyme | k141_158959 | k141_158959_35 | 41891 | 42928 | + | GT2 |
| CAZyme | k141_158959 | k141_158959_36 | 42920 | 45505 | - | GT116 |
| CAZyme | k141_158959 | k141_158959_37 | 45521 | 47143 | - | GT2 |
| CAZyme | k141_158959 | k141_158959_38 | 47156 | 48607 | - | GT2 |
| CAZyme | k141_158959 | k141_158959_39 | 48627 | 49760 | - | GT2 |
Gene ID: k141_158959_20
Type: TC
Location: 24811 - 26214 (-)
Type: TC
Location: 24811 - 26214 (-)
Gene ID: k141_158959_21
Type: CAZyme
Location: 26269 - 27129 (-)
Type: CAZyme
Location: 26269 - 27129 (-)
Gene ID: k141_158959_22
Type: CAZyme
Location: 27139 - 28113 (-)
Type: CAZyme
Location: 27139 - 28113 (-)
Gene ID: k141_158959_23
Type: CAZyme
Location: 28114 - 29133 (-)
Type: CAZyme
Location: 28114 - 29133 (-)
Gene ID: k141_158959_24
Type: pfam
Location: 29138 - 30205 (-)
Type: pfam
Location: 29138 - 30205 (-)
Gene ID: k141_158959_25
Type: TC
Location: 30207 - 31973 (-)
Type: TC
Location: 30207 - 31973 (-)
Gene ID: k141_158959_26
Type: TC
Location: 31986 - 32771 (-)
Type: TC
Location: 31986 - 32771 (-)
Gene ID: k141_158959_27
Type: CAZyme
Location: 32844 - 33875 (-)
Type: CAZyme
Location: 32844 - 33875 (-)
Gene ID: k141_158959_28
Type: CAZyme
Location: 33881 - 34936 (-)
Type: CAZyme
Location: 33881 - 34936 (-)
Gene ID: k141_158959_29
Type: CAZyme
Location: 34933 - 36561 (-)
Type: CAZyme
Location: 34933 - 36561 (-)
Gene ID: k141_158959_30
Type: CAZyme
Location: 36570 - 38228 (-)
Type: CAZyme
Location: 36570 - 38228 (-)
Gene ID: k141_158959_31
Type: CAZyme
Location: 38228 - 39274 (-)
Type: CAZyme
Location: 38228 - 39274 (-)
Gene ID: k141_158959_32
Type:
Location: 39438 - 39707 (-)
Type:
Location: 39438 - 39707 (-)
Gene ID: k141_158959_33
Type:
Location: 39728 - 40021 (-)
Type:
Location: 39728 - 40021 (-)
Gene ID: k141_158959_34
Type: CAZyme
Location: 40259 - 41803 (-)
Type: CAZyme
Location: 40259 - 41803 (-)
Gene ID: k141_158959_35
Type: CAZyme
Location: 41891 - 42928 (+)
Type: CAZyme
Location: 41891 - 42928 (+)
Gene ID: k141_158959_36
Type: CAZyme
Location: 42920 - 45505 (-)
Type: CAZyme
Location: 42920 - 45505 (-)
Gene ID: k141_158959_37
Type: CAZyme
Location: 45521 - 47143 (-)
Type: CAZyme
Location: 45521 - 47143 (-)
Gene ID: k141_158959_38
Type: CAZyme
Location: 47156 - 48607 (-)
Type: CAZyme
Location: 47156 - 48607 (-)
Gene ID: k141_158959_39
Type: CAZyme
Location: 48627 - 49760 (-)
Type: CAZyme
Location: 48627 - 49760 (-)
Taxonomic Lineage
Domain
Archaea
Phylum
Methanobacteriota
Class
Methanobacteria
Order
Methanobacteriales
Family
Methanobacteriaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.