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Cluster: CGMR002033_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_6980 k141_6980_4 2975 3919 - GT2
pfam k141_6980 k141_6980_5 3921 4319 - GtrA_DPMS_TM
CAZyme k141_6980 k141_6980_6 4402 6585 - GT2 | GT2
TC k141_6980 k141_6980_7 6598 7371 - 3.A.1.103.4
TC k141_6980 k141_6980_8 7384 8517 - 3.A.1.103.4
pfam k141_6980 k141_6980_9 8707 10671 - DUF6077
pfam k141_6980 k141_6980_10 10749 11090 - DUF2304
CAZyme k141_6980 k141_6980_11 11101 11772 - GT2
Gene ID: k141_6980_4
Type: CAZyme
Location: 2975 - 3919 (-)
Gene ID: k141_6980_5
Type: pfam
Location: 3921 - 4319 (-)
Gene ID: k141_6980_6
Type: CAZyme
Location: 4402 - 6585 (-)
Gene ID: k141_6980_7
Type: TC
Location: 6598 - 7371 (-)
Gene ID: k141_6980_8
Type: TC
Location: 7384 - 8517 (-)
Gene ID: k141_6980_9
Type: pfam
Location: 8707 - 10671 (-)
Gene ID: k141_6980_10
Type: pfam
Location: 10749 - 11090 (-)
Gene ID: k141_6980_11
Type: CAZyme
Location: 11101 - 11772 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_6980_6 vegan > omnivore 2.73661 0.04014
k141_6980_7 vegan > omnivore 2.77190 0.04014
k141_6980_8 vegan > omnivore 2.16908 0.04014

🧭 Explore Read Mapping of CGC

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