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Cluster: CGMR001923_CGC99

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_16457 k141_16457_47 60745 62607 + 1.E.43.3.3
NULL(UNKNOWN) k141_16457 k141_16457_48 62700 64100 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_16457 k141_16457_49 64185 65063 + adh_short | KR | adh_short_C2
TC k141_16457 k141_16457_50 65209 66090 + 3.A.11.1.4
TF k141_16457 k141_16457_51 66110 67081 - HTH_5
STP k141_16457 k141_16457_52 67384 69075 + SBP_bac_1
TC k141_16457 k141_16457_53 69118 70092 + 3.A.1.1.10
TC k141_16457 k141_16457_54 70104 71006 + 3.A.1.1.29
CAZyme k141_16457 k141_16457_55 71050 71931 + GH43_34
pfam k141_16457 k141_16457_56 72258 72986 + DUF5131
peptidase k141_16457 k141_16457_57 73014 74462 - S01.UPB
CAZyme k141_16457 k141_16457_58 74637 75455 - CE4
TF k141_16457 k141_16457_59 75563 76567 - LacI
TC k141_16457 k141_16457_60 76883 77830 + 3.A.1.1.10
TC k141_16457 k141_16457_61 77847 78743 + 3.A.1.1.29
Gene ID: k141_16457_47
Type: TC
Location: 60745 - 62607 (+)
Gene ID: k141_16457_48
Type:
Location: 62700 - 64100 (+)
Gene ID: k141_16457_49
Type: pfam
Location: 64185 - 65063 (+)
Gene ID: k141_16457_50
Type: TC
Location: 65209 - 66090 (+)
Gene ID: k141_16457_51
Type: TF
Location: 66110 - 67081 (-)
Gene ID: k141_16457_52
Type: STP
Location: 67384 - 69075 (+)
Gene ID: k141_16457_53
Type: TC
Location: 69118 - 70092 (+)
Gene ID: k141_16457_54
Type: TC
Location: 70104 - 71006 (+)
Gene ID: k141_16457_55
Type: CAZyme
Location: 71050 - 71931 (+)
Gene ID: k141_16457_56
Type: pfam
Location: 72258 - 72986 (+)
Gene ID: k141_16457_57
Type: peptidase
Location: 73014 - 74462 (-)
Gene ID: k141_16457_58
Type: CAZyme
Location: 74637 - 75455 (-)
Gene ID: k141_16457_59
Type: TF
Location: 75563 - 76567 (-)
Gene ID: k141_16457_60
Type: TC
Location: 76883 - 77830 (+)
Gene ID: k141_16457_61
Type: TC
Location: 77847 - 78743 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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