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Cluster: CGMR001923_CGC88

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_2553 k141_2553_14 13548 15365 + 8.A.59.2.1
TF k141_2553 k141_2553_15 15358 16806 + HTH_AraC
STP k141_2553 k141_2553_16 16976 18397 + SBP_bac_1
TC k141_2553 k141_2553_17 18420 19385 + 3.A.1.1.11
TC k141_2553 k141_2553_18 19388 20215 + 3.A.1.1.11
CAZyme k141_2553 k141_2553_19 20263 21972 + GH63
CAZyme k141_2553 k141_2553_20 22114 24039 + GH36
Gene ID: k141_2553_14
Type: TC
Location: 13548 - 15365 (+)
Gene ID: k141_2553_15
Type: TF
Location: 15358 - 16806 (+)
Gene ID: k141_2553_16
Type: STP
Location: 16976 - 18397 (+)
Gene ID: k141_2553_17
Type: TC
Location: 18420 - 19385 (+)
Gene ID: k141_2553_18
Type: TC
Location: 19388 - 20215 (+)
Gene ID: k141_2553_19
Type: CAZyme
Location: 20263 - 21972 (+)
Gene ID: k141_2553_20
Type: CAZyme
Location: 22114 - 24039 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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