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Cluster: CGMR001923_CGC85

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_228023 k141_228023_2 699 1748 - 9.A.11.1.1
pfam k141_228023 k141_228023_3 1841 2488 - ABC2_membrane_5
TC k141_228023 k141_228023_4 2485 3357 - 3.A.1.149.1
TF k141_228023 k141_228023_5 3417 3785 - GntR
TF k141_228023 k141_228023_6 3941 4378 + MerR
TC k141_228023 k141_228023_7 4826 5545 + 3.A.1.105.18
pfam k141_228023 k141_228023_8 5542 6291 + ABC2_membrane | ABC2_membrane_3
CAZyme k141_228023 k141_228023_9 6494 9031 + GH2
CAZyme k141_228023 k141_228023_10 9127 11166 - GH42
TC k141_228023 k141_228023_11 11181 12023 - 3.A.1.1.11
TC k141_228023 k141_228023_12 12040 12993 - 3.A.1.1.36
Gene ID: k141_228023_2
Type: TC
Location: 699 - 1748 (-)
Gene ID: k141_228023_3
Type: pfam
Location: 1841 - 2488 (-)
Gene ID: k141_228023_4
Type: TC
Location: 2485 - 3357 (-)
Gene ID: k141_228023_5
Type: TF
Location: 3417 - 3785 (-)
Gene ID: k141_228023_6
Type: TF
Location: 3941 - 4378 (+)
Gene ID: k141_228023_7
Type: TC
Location: 4826 - 5545 (+)
Gene ID: k141_228023_8
Type: pfam
Location: 5542 - 6291 (+)
Gene ID: k141_228023_9
Type: CAZyme
Location: 6494 - 9031 (+)
Gene ID: k141_228023_10
Type: CAZyme
Location: 9127 - 11166 (-)
Gene ID: k141_228023_11
Type: TC
Location: 11181 - 12023 (-)
Gene ID: k141_228023_12
Type: TC
Location: 12040 - 12993 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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