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Cluster: CGMR001923_CGC81

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_74529 k141_74529_16 20920 22620 + 1.A.33.1.4
TC k141_74529 k141_74529_17 22764 23831 - 9.A.23.1.1
TF k141_74529 k141_74529_18 23973 24485 - HTH_11
TC k141_74529 k141_74529_19 25080 26807 + 8.A.59.2.1
TF k141_74529 k141_74529_20 26810 27562 + HTH_AraC
pfam k141_74529 k141_74529_21 27831 29579 + SBP_bac_1 | SBP_bac_8
TC k141_74529 k141_74529_22 29690 30637 + 3.A.1.1.10
TC k141_74529 k141_74529_23 30658 31572 + 3.A.1.1.39
CAZyme k141_74529 k141_74529_24 31645 33567 + GH51_1
pfam k141_74529 k141_74529_25 33672 34541 - DUF362
NULL(UNKNOWN) k141_74529 k141_74529_26 34888 35742 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_74529 k141_74529_27 35878 36762 - 3.A.1.1.29
TC k141_74529 k141_74529_28 36780 37697 - 3.A.1.1.29
Gene ID: k141_74529_16
Type: TC
Location: 20920 - 22620 (+)
Gene ID: k141_74529_17
Type: TC
Location: 22764 - 23831 (-)
Gene ID: k141_74529_18
Type: TF
Location: 23973 - 24485 (-)
Gene ID: k141_74529_19
Type: TC
Location: 25080 - 26807 (+)
Gene ID: k141_74529_20
Type: TF
Location: 26810 - 27562 (+)
Gene ID: k141_74529_21
Type: pfam
Location: 27831 - 29579 (+)
Gene ID: k141_74529_22
Type: TC
Location: 29690 - 30637 (+)
Gene ID: k141_74529_23
Type: TC
Location: 30658 - 31572 (+)
Gene ID: k141_74529_24
Type: CAZyme
Location: 31645 - 33567 (+)
Gene ID: k141_74529_25
Type: pfam
Location: 33672 - 34541 (-)
Gene ID: k141_74529_26
Type:
Location: 34888 - 35742 (+)
Gene ID: k141_74529_27
Type: TC
Location: 35878 - 36762 (-)
Gene ID: k141_74529_28
Type: TC
Location: 36780 - 37697 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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