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Cluster: CGMR001923_CGC73

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_224262 k141_224262_11 9104 11653 - GH2
CAZyme k141_224262 k141_224262_12 11650 13527 - GH20
sulfatase k141_224262 k141_224262_13 13542 15011 - S1_61
TF k141_224262 k141_224262_14 15087 15845 - 0035607 | 0035607
TC k141_224262 k141_224262_15 15820 17610 - 8.A.59.2.1
STP k141_224262 k141_224262_16 17785 19320 - SBP_bac_1
TC k141_224262 k141_224262_17 19392 20336 - 3.A.1.1.29
TC k141_224262 k141_224262_18 20348 21292 - 3.A.1.1.10
sulfatase k141_224262 k141_224262_19 21828 23294 + S1_46
NULL(UNKNOWN) k141_224262 k141_224262_20 23415 24404 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_224262 k141_224262_21 24477 25763 - GH125
Gene ID: k141_224262_11
Type: CAZyme
Location: 9104 - 11653 (-)
Gene ID: k141_224262_12
Type: CAZyme
Location: 11650 - 13527 (-)
Gene ID: k141_224262_13
Type: sulfatase
Location: 13542 - 15011 (-)
Gene ID: k141_224262_14
Type: TF
Location: 15087 - 15845 (-)
Gene ID: k141_224262_15
Type: TC
Location: 15820 - 17610 (-)
Gene ID: k141_224262_16
Type: STP
Location: 17785 - 19320 (-)
Gene ID: k141_224262_17
Type: TC
Location: 19392 - 20336 (-)
Gene ID: k141_224262_18
Type: TC
Location: 20348 - 21292 (-)
Gene ID: k141_224262_19
Type: sulfatase
Location: 21828 - 23294 (+)
Gene ID: k141_224262_20
Type:
Location: 23415 - 24404 (-)
Gene ID: k141_224262_21
Type: CAZyme
Location: 24477 - 25763 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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