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Cluster: CGMR001923_CGC72

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_105637 k141_105637_20 25876 26781 - 3.A.1.1.10
TC k141_105637 k141_105637_21 26802 27764 - 3.A.1.1.10
pfam k141_105637 k141_105637_22 28096 28461 + Gp49
TF k141_105637 k141_105637_23 28458 28742 + HTH_3
TC k141_105637 k141_105637_24 28833 30101 - 2.A.40.1.4
peptidase k141_105637 k141_105637_25 30196 31431 - M38.UNW
TC k141_105637 k141_105637_26 31435 32685 - 2.A.39.1.1
STP k141_105637 k141_105637_27 33135 34748 - SBP_bac_1
TC k141_105637 k141_105637_28 34855 35769 - 3.A.1.1.29
TC k141_105637 k141_105637_29 35828 36754 - 3.A.1.1.10
TF k141_105637 k141_105637_30 36966 38069 + HTH_AraC | HTH_AraC
TC k141_105637 k141_105637_31 38059 39876 + 8.A.59.2.1
CAZyme k141_105637 k141_105637_32 39889 41457 + GH123
Gene ID: k141_105637_20
Type: TC
Location: 25876 - 26781 (-)
Gene ID: k141_105637_21
Type: TC
Location: 26802 - 27764 (-)
Gene ID: k141_105637_22
Type: pfam
Location: 28096 - 28461 (+)
Gene ID: k141_105637_23
Type: TF
Location: 28458 - 28742 (+)
Gene ID: k141_105637_24
Type: TC
Location: 28833 - 30101 (-)
Gene ID: k141_105637_25
Type: peptidase
Location: 30196 - 31431 (-)
Gene ID: k141_105637_26
Type: TC
Location: 31435 - 32685 (-)
Gene ID: k141_105637_27
Type: STP
Location: 33135 - 34748 (-)
Gene ID: k141_105637_28
Type: TC
Location: 34855 - 35769 (-)
Gene ID: k141_105637_29
Type: TC
Location: 35828 - 36754 (-)
Gene ID: k141_105637_30
Type: TF
Location: 36966 - 38069 (+)
Gene ID: k141_105637_31
Type: TC
Location: 38059 - 39876 (+)
Gene ID: k141_105637_32
Type: CAZyme
Location: 39889 - 41457 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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