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Cluster: CGMR001923_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_108791 k141_108791_4 2254 3006 - 2.A.102.3.2
pfam k141_108791 k141_108791_5 3264 4370 + DUF3810
TC k141_108791 k141_108791_6 4586 5524 + 3.A.1.1.10
TC k141_108791 k141_108791_7 5543 6466 + 3.A.1.1.10
STP k141_108791 k141_108791_8 6524 8260 + SBP_bac_1
CAZyme k141_108791 k141_108791_9 8344 11451 + GH106
CAZyme k141_108791 k141_108791_10 11477 14578 + GH38
STP k141_108791 k141_108791_11 14608 15945 + SBP_bac_1
TC k141_108791 k141_108791_12 15967 17742 + 9.B.33.1.1
Gene ID: k141_108791_4
Type: TC
Location: 2254 - 3006 (-)
Gene ID: k141_108791_5
Type: pfam
Location: 3264 - 4370 (+)
Gene ID: k141_108791_6
Type: TC
Location: 4586 - 5524 (+)
Gene ID: k141_108791_7
Type: TC
Location: 5543 - 6466 (+)
Gene ID: k141_108791_8
Type: STP
Location: 6524 - 8260 (+)
Gene ID: k141_108791_9
Type: CAZyme
Location: 8344 - 11451 (+)
Gene ID: k141_108791_10
Type: CAZyme
Location: 11477 - 14578 (+)
Gene ID: k141_108791_11
Type: STP
Location: 14608 - 15945 (+)
Gene ID: k141_108791_12
Type: TC
Location: 15967 - 17742 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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