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Cluster: CGMR001923_CGC69

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_148995 k141_148995_12 12976 13845 + 3.A.1.1.41
TC k141_148995 k141_148995_13 13863 14651 + 3.A.1.1.20
pfam k141_148995 k141_148995_14 14689 16230 + ADP_ribosyl_GH
TF k141_148995 k141_148995_15 16344 17807 - HTH_AraC | HTH_AraC
TC k141_148995 k141_148995_16 18027 19661 + 3.A.1.135.5
TC k141_148995 k141_148995_17 20016 20957 + 3.A.1.1.10
TC k141_148995 k141_148995_18 20982 21899 + 3.A.1.1.10
STP k141_148995 k141_148995_19 21969 23627 + SBP_bac_1
TF k141_148995 k141_148995_20 23773 25974 + HTH_AraC
CAZyme k141_148995 k141_148995_21 25996 28326 + GH2
CAZyme k141_148995 k141_148995_22 28391 30427 + GH115
Gene ID: k141_148995_12
Type: TC
Location: 12976 - 13845 (+)
Gene ID: k141_148995_13
Type: TC
Location: 13863 - 14651 (+)
Gene ID: k141_148995_14
Type: pfam
Location: 14689 - 16230 (+)
Gene ID: k141_148995_15
Type: TF
Location: 16344 - 17807 (-)
Gene ID: k141_148995_16
Type: TC
Location: 18027 - 19661 (+)
Gene ID: k141_148995_17
Type: TC
Location: 20016 - 20957 (+)
Gene ID: k141_148995_18
Type: TC
Location: 20982 - 21899 (+)
Gene ID: k141_148995_19
Type: STP
Location: 21969 - 23627 (+)
Gene ID: k141_148995_20
Type: TF
Location: 23773 - 25974 (+)
Gene ID: k141_148995_21
Type: CAZyme
Location: 25996 - 28326 (+)
Gene ID: k141_148995_22
Type: CAZyme
Location: 28391 - 30427 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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