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Cluster: CGMR001923_CGC62

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_105989 k141_105989_61 66320 67696 + GH4
pfam k141_105989 k141_105989_62 67875 68861 + EamA | EamA
TC k141_105989 k141_105989_63 68928 70727 + 9.B.33.1.1
TF k141_105989 k141_105989_64 70724 72250 + HTH_AraC
STP k141_105989 k141_105989_65 72476 73741 + SBP_bac_1
TC k141_105989 k141_105989_66 73807 74709 + 3.A.1.1.34
TC k141_105989 k141_105989_67 74807 75616 + 3.A.1.1.34
Gene ID: k141_105989_61
Type: CAZyme
Location: 66320 - 67696 (+)
Gene ID: k141_105989_62
Type: pfam
Location: 67875 - 68861 (+)
Gene ID: k141_105989_63
Type: TC
Location: 68928 - 70727 (+)
Gene ID: k141_105989_64
Type: TF
Location: 70724 - 72250 (+)
Gene ID: k141_105989_65
Type: STP
Location: 72476 - 73741 (+)
Gene ID: k141_105989_66
Type: TC
Location: 73807 - 74709 (+)
Gene ID: k141_105989_67
Type: TC
Location: 74807 - 75616 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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