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Cluster: CGMR001923_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_149284 k141_149284_162 176445 177734 + 1.A.11.2.7
TF k141_149284 k141_149284_163 177881 178798 - HTH_1
TC k141_149284 k141_149284_164 179020 180426 + 2.A.66.1.33
CAZyme k141_149284 k141_149284_165 180540 183047 + GH95
STP k141_149284 k141_149284_166 183207 183701 - HD
TC k141_149284 k141_149284_167 183819 186269 - 3.A.3.23.2
pfam k141_149284 k141_149284_168 186546 187460 + Acetyltransf_1 | Acetyltransf_1 | FR47 | Acetyltransf_3 | Acetyltransf_7 | Acetyltransf_10
NULL(UNKNOWN) k141_149284 k141_149284_169 187595 189907 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_149284 k141_149284_170 189964 190854 - 3.A.1.1.9
TC k141_149284 k141_149284_171 190869 191801 - 3.A.1.1.9
TC k141_149284 k141_149284_172 191931 193715 - 3.A.1.1.9
TF k141_149284 k141_149284_173 193902 195263 - HTH_AraC | HTH_AraC
TC k141_149284 k141_149284_174 195265 197040 - 9.B.33.1.1
TC k141_149284 k141_149284_175 197474 198808 + 9.A.40.2.1
pfam k141_149284 k141_149284_176 198805 199590 + S6PP | Hydrolase_3
TF k141_149284 k141_149284_177 199943 200410 + MarR
TC k141_149284 k141_149284_178 200445 202595 + 3.A.1.135.6
TC k141_149284 k141_149284_179 202592 204430 + 3.A.1.135.6
Gene ID: k141_149284_162
Type: TC
Location: 176445 - 177734 (+)
Gene ID: k141_149284_163
Type: TF
Location: 177881 - 178798 (-)
Gene ID: k141_149284_164
Type: TC
Location: 179020 - 180426 (+)
Gene ID: k141_149284_165
Type: CAZyme
Location: 180540 - 183047 (+)
Gene ID: k141_149284_166
Type: STP
Location: 183207 - 183701 (-)
Gene ID: k141_149284_167
Type: TC
Location: 183819 - 186269 (-)
Gene ID: k141_149284_168
Type: pfam
Location: 186546 - 187460 (+)
Gene ID: k141_149284_169
Type:
Location: 187595 - 189907 (-)
Gene ID: k141_149284_170
Type: TC
Location: 189964 - 190854 (-)
Gene ID: k141_149284_171
Type: TC
Location: 190869 - 191801 (-)
Gene ID: k141_149284_172
Type: TC
Location: 191931 - 193715 (-)
Gene ID: k141_149284_173
Type: TF
Location: 193902 - 195263 (-)
Gene ID: k141_149284_174
Type: TC
Location: 195265 - 197040 (-)
Gene ID: k141_149284_175
Type: TC
Location: 197474 - 198808 (+)
Gene ID: k141_149284_176
Type: pfam
Location: 198805 - 199590 (+)
Gene ID: k141_149284_177
Type: TF
Location: 199943 - 200410 (+)
Gene ID: k141_149284_178
Type: TC
Location: 200445 - 202595 (+)
Gene ID: k141_149284_179
Type: TC
Location: 202592 - 204430 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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