Cluster: CGMR001923_CGC47
🧬 Cluster Details
- Gene Count: 20
- CAZyme Count: 6
- Substrate:
- Genome ID: CGMR001923
- CGC Family ID: CGCFAM_05321
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_142619 | k141_142619_162 | 204784 | 206526 | + | 3.A.1.5.2 |
| TC | k141_142619 | k141_142619_163 | 206672 | 207628 | + | 3.A.1.5.19 |
| TC | k141_142619 | k141_142619_164 | 207641 | 208558 | + | 3.A.1.5.2 |
| TC | k141_142619 | k141_142619_165 | 208575 | 209603 | + | 3.A.1.5.19 |
| TC | k141_142619 | k141_142619_166 | 209600 | 210592 | + | 3.A.1.5.19 |
| NULL(UNKNOWN) | k141_142619 | k141_142619_167 | 210613 | 210960 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_142619 | k141_142619_168 | 211360 | 213240 | - | 8.A.59.2.1 |
| TC | k141_142619 | k141_142619_169 | 213458 | 214399 | + | 3.A.1.1.9 |
| TC | k141_142619 | k141_142619_170 | 214466 | 215392 | + | 3.A.1.1.29 |
| STP | k141_142619 | k141_142619_171 | 215441 | 217201 | + | SBP_bac_1 |
| TF | k141_142619 | k141_142619_172 | 217242 | 218735 | - | HTH_AraC |
| CAZyme | k141_142619 | k141_142619_173 | 218853 | 221192 | + | GH95 |
| CAZyme | k141_142619 | k141_142619_174 | 221207 | 222961 | + | GH2 |
| CAZyme | k141_142619 | k141_142619_175 | 222948 | 225791 | + | CBM67 | GH78 |
| pfam | k141_142619 | k141_142619_176 | 225794 | 226720 | + | IU_nuc_hydro |
| NULL(UNKNOWN) | k141_142619 | k141_142619_177 | 226717 | 227871 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_142619 | k141_142619_178 | 227847 | 230627 | + | GH138 |
| CAZyme | k141_142619 | k141_142619_179 | 230643 | 232001 | + | GH29 |
| CAZyme | k141_142619 | k141_142619_180 | 232010 | 234061 | + | GH42 |
| TC | k141_142619 | k141_142619_181 | 234539 | 235264 | + | 2.A.87.1.3 |
Gene ID: k141_142619_162
Type: TC
Location: 204784 - 206526 (+)
Type: TC
Location: 204784 - 206526 (+)
Gene ID: k141_142619_163
Type: TC
Location: 206672 - 207628 (+)
Type: TC
Location: 206672 - 207628 (+)
Gene ID: k141_142619_164
Type: TC
Location: 207641 - 208558 (+)
Type: TC
Location: 207641 - 208558 (+)
Gene ID: k141_142619_165
Type: TC
Location: 208575 - 209603 (+)
Type: TC
Location: 208575 - 209603 (+)
Gene ID: k141_142619_166
Type: TC
Location: 209600 - 210592 (+)
Type: TC
Location: 209600 - 210592 (+)
Gene ID: k141_142619_167
Type:
Location: 210613 - 210960 (+)
Type:
Location: 210613 - 210960 (+)
Gene ID: k141_142619_168
Type: TC
Location: 211360 - 213240 (-)
Type: TC
Location: 211360 - 213240 (-)
Gene ID: k141_142619_169
Type: TC
Location: 213458 - 214399 (+)
Type: TC
Location: 213458 - 214399 (+)
Gene ID: k141_142619_170
Type: TC
Location: 214466 - 215392 (+)
Type: TC
Location: 214466 - 215392 (+)
Gene ID: k141_142619_171
Type: STP
Location: 215441 - 217201 (+)
Type: STP
Location: 215441 - 217201 (+)
Gene ID: k141_142619_172
Type: TF
Location: 217242 - 218735 (-)
Type: TF
Location: 217242 - 218735 (-)
Gene ID: k141_142619_173
Type: CAZyme
Location: 218853 - 221192 (+)
Type: CAZyme
Location: 218853 - 221192 (+)
Gene ID: k141_142619_174
Type: CAZyme
Location: 221207 - 222961 (+)
Type: CAZyme
Location: 221207 - 222961 (+)
Gene ID: k141_142619_175
Type: CAZyme
Location: 222948 - 225791 (+)
Type: CAZyme
Location: 222948 - 225791 (+)
Gene ID: k141_142619_176
Type: pfam
Location: 225794 - 226720 (+)
Type: pfam
Location: 225794 - 226720 (+)
Gene ID: k141_142619_177
Type:
Location: 226717 - 227871 (+)
Type:
Location: 226717 - 227871 (+)
Gene ID: k141_142619_178
Type: CAZyme
Location: 227847 - 230627 (+)
Type: CAZyme
Location: 227847 - 230627 (+)
Gene ID: k141_142619_179
Type: CAZyme
Location: 230643 - 232001 (+)
Type: CAZyme
Location: 230643 - 232001 (+)
Gene ID: k141_142619_180
Type: CAZyme
Location: 232010 - 234061 (+)
Type: CAZyme
Location: 232010 - 234061 (+)
Gene ID: k141_142619_181
Type: TC
Location: 234539 - 235264 (+)
Type: TC
Location: 234539 - 235264 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eisenbergiella
Species
Eisenbergiella tayi
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.