dbCAN Logo

Cluster: CGMR001923_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_142619 k141_142619_133 167988 169715 - GH146
pfam k141_142619 k141_142619_134 169752 170786 - Epimerase
NULL(UNKNOWN) k141_142619 k141_142619_135 170983 172482 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_142619 k141_142619_136 172658 174289 - GH63
TC k141_142619 k141_142619_137 174569 176410 - 8.A.59.2.1
TF k141_142619 k141_142619_138 176436 178028 - HTH_AraC | HTH_AraC
TC k141_142619 k141_142619_139 178224 179168 + 3.A.1.1.10
TC k141_142619 k141_142619_140 179183 180082 + 3.A.1.1.29
Gene ID: k141_142619_133
Type: CAZyme
Location: 167988 - 169715 (-)
Gene ID: k141_142619_134
Type: pfam
Location: 169752 - 170786 (-)
Gene ID: k141_142619_135
Type:
Location: 170983 - 172482 (+)
Gene ID: k141_142619_136
Type: CAZyme
Location: 172658 - 174289 (-)
Gene ID: k141_142619_137
Type: TC
Location: 174569 - 176410 (-)
Gene ID: k141_142619_138
Type: TF
Location: 176436 - 178028 (-)
Gene ID: k141_142619_139
Type: TC
Location: 178224 - 179168 (+)
Gene ID: k141_142619_140
Type: TC
Location: 179183 - 180082 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List