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Cluster: CGMR001923_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_149284 k141_149284_46 49963 51306 + GH29
NULL(UNKNOWN) k141_149284 k141_149284_47 51314 51466 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_149284 k141_149284_48 51706 51918 + Zn_ribbon_13
TC k141_149284 k141_149284_49 52160 53182 + 3.A.1.17.4
pfam k141_149284 k141_149284_50 53212 53865 + Cyclase
pfam k141_149284 k141_149284_51 53880 54773 + Arginase
TC k141_149284 k141_149284_52 54797 55858 + 3.A.1.17.4
Gene ID: k141_149284_46
Type: CAZyme
Location: 49963 - 51306 (+)
Gene ID: k141_149284_47
Type:
Location: 51314 - 51466 (-)
Gene ID: k141_149284_48
Type: pfam
Location: 51706 - 51918 (+)
Gene ID: k141_149284_49
Type: TC
Location: 52160 - 53182 (+)
Gene ID: k141_149284_50
Type: pfam
Location: 53212 - 53865 (+)
Gene ID: k141_149284_51
Type: pfam
Location: 53880 - 54773 (+)
Gene ID: k141_149284_52
Type: TC
Location: 54797 - 55858 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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