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Cluster: CGMR001923_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_213167 k141_213167_2 768 3230 + GT32
pfam k141_213167 k141_213167_3 3227 4249 + Acyl_transf_3
pfam k141_213167 k141_213167_4 4263 4844 + Hexapep | Hexapep_2
CAZyme k141_213167 k141_213167_5 4849 6360 + CBM35 | GH26
TC k141_213167 k141_213167_6 6466 7524 + 2.A.98.1.4
STP k141_213167 k141_213167_7 7851 9524 + SBP_bac_1
TC k141_213167 k141_213167_8 9626 10549 + 3.A.1.1.9
TC k141_213167 k141_213167_9 10876 11757 + 3.A.1.1.9
CAZyme k141_213167 k141_213167_10 11774 14449 + CBM67 | GH78
TF k141_213167 k141_213167_11 14508 15344 - HTH_AraC
pfam k141_213167 k141_213167_12 15874 16869 + YhcG_C | DUF1016_N
TC k141_213167 k141_213167_13 17947 19329 + 2.A.66.1.13
Gene ID: k141_213167_2
Type: CAZyme
Location: 768 - 3230 (+)
Gene ID: k141_213167_3
Type: pfam
Location: 3227 - 4249 (+)
Gene ID: k141_213167_4
Type: pfam
Location: 4263 - 4844 (+)
Gene ID: k141_213167_5
Type: CAZyme
Location: 4849 - 6360 (+)
Gene ID: k141_213167_6
Type: TC
Location: 6466 - 7524 (+)
Gene ID: k141_213167_7
Type: STP
Location: 7851 - 9524 (+)
Gene ID: k141_213167_8
Type: TC
Location: 9626 - 10549 (+)
Gene ID: k141_213167_9
Type: TC
Location: 10876 - 11757 (+)
Gene ID: k141_213167_10
Type: CAZyme
Location: 11774 - 14449 (+)
Gene ID: k141_213167_11
Type: TF
Location: 14508 - 15344 (-)
Gene ID: k141_213167_12
Type: pfam
Location: 15874 - 16869 (+)
Gene ID: k141_213167_13
Type: TC
Location: 17947 - 19329 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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