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Cluster: CGMR001923_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_43534 k141_43534_1 2 931 - GH30_3
TC k141_43534 k141_43534_2 955 1857 - 3.A.1.1.34
TC k141_43534 k141_43534_3 1854 2717 - 3.A.1.1.11
pfam k141_43534 k141_43534_4 2714 5002 - DUF5696
pfam k141_43534 k141_43534_5 4992 7010 - NHL | Yip1
TC k141_43534 k141_43534_6 7024 7908 - 3.A.1.1.39
TC k141_43534 k141_43534_7 7929 8834 - 3.A.1.1.34
STP k141_43534 k141_43534_8 8831 11737 - SBP_bac_1
pfam k141_43534 k141_43534_9 11823 13307 - SBP_bac_1
CAZyme k141_43534 k141_43534_10 13304 14410 - GH5_13
CAZyme k141_43534 k141_43534_11 14727 16049 - GH4
Gene ID: k141_43534_1
Type: CAZyme
Location: 2 - 931 (-)
Gene ID: k141_43534_2
Type: TC
Location: 955 - 1857 (-)
Gene ID: k141_43534_3
Type: TC
Location: 1854 - 2717 (-)
Gene ID: k141_43534_4
Type: pfam
Location: 2714 - 5002 (-)
Gene ID: k141_43534_5
Type: pfam
Location: 4992 - 7010 (-)
Gene ID: k141_43534_6
Type: TC
Location: 7024 - 7908 (-)
Gene ID: k141_43534_7
Type: TC
Location: 7929 - 8834 (-)
Gene ID: k141_43534_8
Type: STP
Location: 8831 - 11737 (-)
Gene ID: k141_43534_9
Type: pfam
Location: 11823 - 13307 (-)
Gene ID: k141_43534_10
Type: CAZyme
Location: 13304 - 14410 (-)
Gene ID: k141_43534_11
Type: CAZyme
Location: 14727 - 16049 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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