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Cluster: CGMR001923_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_116354 k141_116354_14 15707 16594 + 3.A.1.1.34
TC k141_116354 k141_116354_15 16624 17460 + 3.A.1.1.36
STP k141_116354 k141_116354_16 17489 18850 + SBP_bac_1
pfam k141_116354 k141_116354_17 18885 19964 + ADH_zinc_N | ADH_N
TC k141_116354 k141_116354_18 20262 20987 + 9.B.120.1.3
NULL(UNKNOWN) k141_116354 k141_116354_19 21028 21606 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_116354 k141_116354_20 22121 23653 + 3.A.1.120.6
CAZyme k141_116354 k141_116354_21 23753 26440 - GH106
peptidase k141_116354 k141_116354_22 26455 27474 - S09.UPW
TC k141_116354 k141_116354_23 27538 28410 - 3.A.1.1.9
TC k141_116354 k141_116354_24 28426 29337 - 3.A.1.1.9
TC k141_116354 k141_116354_25 29420 31048 - 3.A.1.1.9
TF k141_116354 k141_116354_26 31187 32368 - HTH_AraC
TC k141_116354 k141_116354_27 32361 34109 - 8.A.59.2.1
Gene ID: k141_116354_14
Type: TC
Location: 15707 - 16594 (+)
Gene ID: k141_116354_15
Type: TC
Location: 16624 - 17460 (+)
Gene ID: k141_116354_16
Type: STP
Location: 17489 - 18850 (+)
Gene ID: k141_116354_17
Type: pfam
Location: 18885 - 19964 (+)
Gene ID: k141_116354_18
Type: TC
Location: 20262 - 20987 (+)
Gene ID: k141_116354_19
Type:
Location: 21028 - 21606 (+)
Gene ID: k141_116354_20
Type: TC
Location: 22121 - 23653 (+)
Gene ID: k141_116354_21
Type: CAZyme
Location: 23753 - 26440 (-)
Gene ID: k141_116354_22
Type: peptidase
Location: 26455 - 27474 (-)
Gene ID: k141_116354_23
Type: TC
Location: 27538 - 28410 (-)
Gene ID: k141_116354_24
Type: TC
Location: 28426 - 29337 (-)
Gene ID: k141_116354_25
Type: TC
Location: 29420 - 31048 (-)
Gene ID: k141_116354_26
Type: TF
Location: 31187 - 32368 (-)
Gene ID: k141_116354_27
Type: TC
Location: 32361 - 34109 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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