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Cluster: CGMR001923_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_14636 k141_14636_2 878 2689 - GH2
CAZyme k141_14636 k141_14636_3 2703 4220 - GH43_33
TF k141_14636 k141_14636_4 4685 5707 + HTH_5
TC k141_14636 k141_14636_5 5812 7503 + 3.A.1.1.10
TC k141_14636 k141_14636_6 7557 8513 + 3.A.1.1.10
TC k141_14636 k141_14636_7 8525 9451 + 3.A.1.1.29
NULL(UNKNOWN) k141_14636 k141_14636_8 9817 10638 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_14636 k141_14636_9 10777 11907 - DHHW | DHHW | ALGX
TC k141_14636 k141_14636_10 11925 13340 - 2.A.50.2.1
Gene ID: k141_14636_2
Type: CAZyme
Location: 878 - 2689 (-)
Gene ID: k141_14636_3
Type: CAZyme
Location: 2703 - 4220 (-)
Gene ID: k141_14636_4
Type: TF
Location: 4685 - 5707 (+)
Gene ID: k141_14636_5
Type: TC
Location: 5812 - 7503 (+)
Gene ID: k141_14636_6
Type: TC
Location: 7557 - 8513 (+)
Gene ID: k141_14636_7
Type: TC
Location: 8525 - 9451 (+)
Gene ID: k141_14636_8
Type:
Location: 9817 - 10638 (+)
Gene ID: k141_14636_9
Type: pfam
Location: 10777 - 11907 (-)
Gene ID: k141_14636_10
Type: TC
Location: 11925 - 13340 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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