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Cluster: CGMR001923_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_6581 k141_6581_4 1456 3240 - CE12
TF k141_6581 k141_6581_5 3441 4274 + HTH_AraC
pfam k141_6581 k141_6581_6 4281 4754 - MGS
TC k141_6581 k141_6581_7 4862 6595 - 8.A.59.2.1
TF k141_6581 k141_6581_8 6592 8190 - HTH_AraC | HTH_AraC
TC k141_6581 k141_6581_9 8390 9358 + 3.A.1.1.29
TC k141_6581 k141_6581_10 9400 10320 + 3.A.1.1.29
CAZyme k141_6581 k141_6581_11 10361 11656 + GH4
TC k141_6581 k141_6581_12 11677 13323 + 3.A.1.1.10
Gene ID: k141_6581_4
Type: CAZyme
Location: 1456 - 3240 (-)
Gene ID: k141_6581_5
Type: TF
Location: 3441 - 4274 (+)
Gene ID: k141_6581_6
Type: pfam
Location: 4281 - 4754 (-)
Gene ID: k141_6581_7
Type: TC
Location: 4862 - 6595 (-)
Gene ID: k141_6581_8
Type: TF
Location: 6592 - 8190 (-)
Gene ID: k141_6581_9
Type: TC
Location: 8390 - 9358 (+)
Gene ID: k141_6581_10
Type: TC
Location: 9400 - 10320 (+)
Gene ID: k141_6581_11
Type: CAZyme
Location: 10361 - 11656 (+)
Gene ID: k141_6581_12
Type: TC
Location: 11677 - 13323 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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