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Cluster: CGMR001923_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_93486 k141_93486_2 731 2458 + 8.A.59.2.1
TF k141_93486 k141_93486_3 2451 4013 + HTH_AraC | HTH_AraC
STP k141_93486 k141_93486_4 4214 5575 + SBP_bac_1
TC k141_93486 k141_93486_5 5652 6524 + 3.A.1.1.20
TC k141_93486 k141_93486_6 6521 7357 + 3.A.1.1.28
CAZyme k141_93486 k141_93486_7 7419 8519 + GH5_13
TF k141_93486 k141_93486_8 8650 10149 - HTH_AraC
TC k141_93486 k141_93486_9 10127 11932 - 8.A.59.2.1
Gene ID: k141_93486_2
Type: TC
Location: 731 - 2458 (+)
Gene ID: k141_93486_3
Type: TF
Location: 2451 - 4013 (+)
Gene ID: k141_93486_4
Type: STP
Location: 4214 - 5575 (+)
Gene ID: k141_93486_5
Type: TC
Location: 5652 - 6524 (+)
Gene ID: k141_93486_6
Type: TC
Location: 6521 - 7357 (+)
Gene ID: k141_93486_7
Type: CAZyme
Location: 7419 - 8519 (+)
Gene ID: k141_93486_8
Type: TF
Location: 8650 - 10149 (-)
Gene ID: k141_93486_9
Type: TC
Location: 10127 - 11932 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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