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Cluster: CGMR001923_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_56184 k141_56184_34 41086 41934 + GT2
CAZyme k141_56184 k141_56184_35 41936 43258 + GT4
pfam k141_56184 k141_56184_36 43519 44628 + Phosphodiest
CAZyme k141_56184 k141_56184_37 44708 45871 + GT4
CAZyme k141_56184 k141_56184_38 45868 46860 + GT2
pfam k141_56184 k141_56184_39 46946 48487 + SLFN_AlbA_2 | HATPase_c_4
TC k141_56184 k141_56184_40 48666 49661 + 9.B.18.2.1
STP k141_56184 k141_56184_41 49771 50979 + Aminotran_1_2
pfam k141_56184 k141_56184_42 51011 52483 + PMT_2
CAZyme k141_56184 k141_56184_43 52509 53546 + GT2
pfam k141_56184 k141_56184_44 53575 54822 + ATP-grasp_3 | ATP-grasp_4
TC k141_56184 k141_56184_45 55196 56584 + 2.A.66.1.32
TC k141_56184 k141_56184_46 56600 57220 + 2.A.115.2.14
Gene ID: k141_56184_34
Type: CAZyme
Location: 41086 - 41934 (+)
Gene ID: k141_56184_35
Type: CAZyme
Location: 41936 - 43258 (+)
Gene ID: k141_56184_36
Type: pfam
Location: 43519 - 44628 (+)
Gene ID: k141_56184_37
Type: CAZyme
Location: 44708 - 45871 (+)
Gene ID: k141_56184_38
Type: CAZyme
Location: 45868 - 46860 (+)
Gene ID: k141_56184_39
Type: pfam
Location: 46946 - 48487 (+)
Gene ID: k141_56184_40
Type: TC
Location: 48666 - 49661 (+)
Gene ID: k141_56184_41
Type: STP
Location: 49771 - 50979 (+)
Gene ID: k141_56184_42
Type: pfam
Location: 51011 - 52483 (+)
Gene ID: k141_56184_43
Type: CAZyme
Location: 52509 - 53546 (+)
Gene ID: k141_56184_44
Type: pfam
Location: 53575 - 54822 (+)
Gene ID: k141_56184_45
Type: TC
Location: 55196 - 56584 (+)
Gene ID: k141_56184_46
Type: TC
Location: 56600 - 57220 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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