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Cluster: CGMR001923_CGC150

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_226325 k141_226325_36 38140 39855 + 9.B.33.1.1
TF k141_226325 k141_226325_37 39986 41620 + HTH_AraC | HTH_AraC
TC k141_226325 k141_226325_38 41796 42716 + 3.A.1.1.9
TC k141_226325 k141_226325_39 42737 43633 + 3.A.1.1.9
TC k141_226325 k141_226325_40 43947 45665 + 3.A.1.1.9
CAZyme k141_226325 k141_226325_41 45798 47216 + GH32
peptidase k141_226325 k141_226325_42 47302 48558 - M24.UNB
CAZyme k141_226325 k141_226325_43 48738 51008 + GH146
TF k141_226325 k141_226325_44 51083 52606 + HTH_AraC | HTH_AraC
TC k141_226325 k141_226325_45 52609 54381 + 9.B.33.1.1
TC k141_226325 k141_226325_46 54694 55671 + 3.A.1.1.29
TC k141_226325 k141_226325_47 55683 56588 + 3.A.1.1.29
Gene ID: k141_226325_36
Type: TC
Location: 38140 - 39855 (+)
Gene ID: k141_226325_37
Type: TF
Location: 39986 - 41620 (+)
Gene ID: k141_226325_38
Type: TC
Location: 41796 - 42716 (+)
Gene ID: k141_226325_39
Type: TC
Location: 42737 - 43633 (+)
Gene ID: k141_226325_40
Type: TC
Location: 43947 - 45665 (+)
Gene ID: k141_226325_41
Type: CAZyme
Location: 45798 - 47216 (+)
Gene ID: k141_226325_42
Type: peptidase
Location: 47302 - 48558 (-)
Gene ID: k141_226325_43
Type: CAZyme
Location: 48738 - 51008 (+)
Gene ID: k141_226325_44
Type: TF
Location: 51083 - 52606 (+)
Gene ID: k141_226325_45
Type: TC
Location: 52609 - 54381 (+)
Gene ID: k141_226325_46
Type: TC
Location: 54694 - 55671 (+)
Gene ID: k141_226325_47
Type: TC
Location: 55683 - 56588 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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