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Cluster: CGMR001923_CGC148

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_233739 k141_233739_14 16301 17236 + 3.A.1.1.10
TC k141_233739 k141_233739_15 17254 18186 + 3.A.1.1.10
STP k141_233739 k141_233739_16 18267 20081 + SBP_bac_1
CAZyme k141_233739 k141_233739_17 20151 21554 + GH32
pfam k141_233739 k141_233739_18 21718 22965 - AdoHcyase_NAD | 2-Hacid_dh_C | AdoHcyase | AdoHcyase | KARI_N
CAZyme k141_233739 k141_233739_19 23169 25724 - GH97
TC k141_233739 k141_233739_20 25763 26647 - 3.A.1.1.9
TC k141_233739 k141_233739_21 26659 27516 - 3.A.1.1.9
STP k141_233739 k141_233739_22 27627 29339 - SBP_bac_1
TF k141_233739 k141_233739_23 29731 31026 - HTH_AraC | HTH_AraC
TC k141_233739 k141_233739_24 31019 32704 - 8.A.59.2.1
Gene ID: k141_233739_14
Type: TC
Location: 16301 - 17236 (+)
Gene ID: k141_233739_15
Type: TC
Location: 17254 - 18186 (+)
Gene ID: k141_233739_16
Type: STP
Location: 18267 - 20081 (+)
Gene ID: k141_233739_17
Type: CAZyme
Location: 20151 - 21554 (+)
Gene ID: k141_233739_18
Type: pfam
Location: 21718 - 22965 (-)
Gene ID: k141_233739_19
Type: CAZyme
Location: 23169 - 25724 (-)
Gene ID: k141_233739_20
Type: TC
Location: 25763 - 26647 (-)
Gene ID: k141_233739_21
Type: TC
Location: 26659 - 27516 (-)
Gene ID: k141_233739_22
Type: STP
Location: 27627 - 29339 (-)
Gene ID: k141_233739_23
Type: TF
Location: 29731 - 31026 (-)
Gene ID: k141_233739_24
Type: TC
Location: 31019 - 32704 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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