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Cluster: CGMR001923_CGC142

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_34318 k141_34318_5 6377 7693 + 3.A.1.122.1
NULL(UNKNOWN) k141_34318 k141_34318_6 7707 8333 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_34318 k141_34318_7 8387 9079 + 3.A.1.122.7
pfam k141_34318 k141_34318_8 9153 9794 + PG_binding_1
TC k141_34318 k141_34318_9 9888 10949 - 3.A.1.11.7
TC k141_34318 k141_34318_10 10982 11764 - 3.A.1.11.1
TC k141_34318 k141_34318_11 11761 12585 - 3.A.1.11.8
TC k141_34318 k141_34318_12 12578 13651 - 3.A.1.11.8
TF k141_34318 k141_34318_13 13712 14251 - HTH_3
pfam k141_34318 k141_34318_14 14696 15760 + Lactonase
CAZyme k141_34318 k141_34318_15 15808 18174 + GH3
TC k141_34318 k141_34318_16 18326 19279 + 9.B.34.1.3
Gene ID: k141_34318_5
Type: TC
Location: 6377 - 7693 (+)
Gene ID: k141_34318_6
Type:
Location: 7707 - 8333 (+)
Gene ID: k141_34318_7
Type: TC
Location: 8387 - 9079 (+)
Gene ID: k141_34318_8
Type: pfam
Location: 9153 - 9794 (+)
Gene ID: k141_34318_9
Type: TC
Location: 9888 - 10949 (-)
Gene ID: k141_34318_10
Type: TC
Location: 10982 - 11764 (-)
Gene ID: k141_34318_11
Type: TC
Location: 11761 - 12585 (-)
Gene ID: k141_34318_12
Type: TC
Location: 12578 - 13651 (-)
Gene ID: k141_34318_13
Type: TF
Location: 13712 - 14251 (-)
Gene ID: k141_34318_14
Type: pfam
Location: 14696 - 15760 (+)
Gene ID: k141_34318_15
Type: CAZyme
Location: 15808 - 18174 (+)
Gene ID: k141_34318_16
Type: TC
Location: 18326 - 19279 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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