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Cluster: CGMR001923_CGC141

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_46484 k141_46484_1 72 1436 - GH29
TC k141_46484 k141_46484_2 1654 2595 + 3.A.1.1.29
TC k141_46484 k141_46484_3 2626 3510 + 3.A.1.1.29
TC k141_46484 k141_46484_4 3533 5152 + 3.A.1.1.29
TF k141_46484 k141_46484_5 5226 6689 - HTH_AraC | HTH_AraC
pfam k141_46484 k141_46484_6 6667 8457 - His_kinase
TC k141_46484 k141_46484_7 8635 9297 + 3.A.1.12.8
TC k141_46484 k141_46484_8 9294 10019 + 3.A.1.12.4
TC k141_46484 k141_46484_9 10070 10960 + 3.A.1.12.8
Gene ID: k141_46484_1
Type: CAZyme
Location: 72 - 1436 (-)
Gene ID: k141_46484_2
Type: TC
Location: 1654 - 2595 (+)
Gene ID: k141_46484_3
Type: TC
Location: 2626 - 3510 (+)
Gene ID: k141_46484_4
Type: TC
Location: 3533 - 5152 (+)
Gene ID: k141_46484_5
Type: TF
Location: 5226 - 6689 (-)
Gene ID: k141_46484_6
Type: pfam
Location: 6667 - 8457 (-)
Gene ID: k141_46484_7
Type: TC
Location: 8635 - 9297 (+)
Gene ID: k141_46484_8
Type: TC
Location: 9294 - 10019 (+)
Gene ID: k141_46484_9
Type: TC
Location: 10070 - 10960 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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