dbCAN Logo

Cluster: CGMR001923_CGC139

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_160013 k141_160013_10 13600 14961 + GH1
CAZyme k141_160013 k141_160013_11 14961 18005 + GH106
CAZyme k141_160013 k141_160013_12 17998 19695 + GH78
CAZyme k141_160013 k141_160013_13 19752 22241 + GH78
TF k141_160013 k141_160013_14 22313 24514 - HTH_AraC
TC k141_160013 k141_160013_15 24856 26487 + 3.A.1.1.10
TC k141_160013 k141_160013_16 26582 27562 + 3.A.1.1.10
TC k141_160013 k141_160013_17 27575 28486 + 3.A.1.1.29
Gene ID: k141_160013_10
Type: CAZyme
Location: 13600 - 14961 (+)
Gene ID: k141_160013_11
Type: CAZyme
Location: 14961 - 18005 (+)
Gene ID: k141_160013_12
Type: CAZyme
Location: 17998 - 19695 (+)
Gene ID: k141_160013_13
Type: CAZyme
Location: 19752 - 22241 (+)
Gene ID: k141_160013_14
Type: TF
Location: 22313 - 24514 (-)
Gene ID: k141_160013_15
Type: TC
Location: 24856 - 26487 (+)
Gene ID: k141_160013_16
Type: TC
Location: 26582 - 27562 (+)
Gene ID: k141_160013_17
Type: TC
Location: 27575 - 28486 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List