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Cluster: CGMR001923_CGC138

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_223331 k141_223331_10 11358 11930 + 2.A.51.1.5
TF k141_223331 k141_223331_11 11903 12784 + MerR
CAZyme k141_223331 k141_223331_12 12810 14087 + GH32
TC k141_223331 k141_223331_13 14176 15564 + 2.A.66.1.33
CAZyme k141_223331 k141_223331_14 15688 17007 - GH29
TF k141_223331 k141_223331_15 17146 17955 + HTH_AraC | HTH_AraC
TC k141_223331 k141_223331_16 17994 19322 + 3.A.1.121.4
TC k141_223331 k141_223331_17 19582 21423 + 3.A.1.111.2
TC k141_223331 k141_223331_18 21410 23248 + 3.A.1.111.2
NULL(UNKNOWN) k141_223331 k141_223331_19 23227 23412 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_223331 k141_223331_20 23447 24469 + GH29
Gene ID: k141_223331_10
Type: TC
Location: 11358 - 11930 (+)
Gene ID: k141_223331_11
Type: TF
Location: 11903 - 12784 (+)
Gene ID: k141_223331_12
Type: CAZyme
Location: 12810 - 14087 (+)
Gene ID: k141_223331_13
Type: TC
Location: 14176 - 15564 (+)
Gene ID: k141_223331_14
Type: CAZyme
Location: 15688 - 17007 (-)
Gene ID: k141_223331_15
Type: TF
Location: 17146 - 17955 (+)
Gene ID: k141_223331_16
Type: TC
Location: 17994 - 19322 (+)
Gene ID: k141_223331_17
Type: TC
Location: 19582 - 21423 (+)
Gene ID: k141_223331_18
Type: TC
Location: 21410 - 23248 (+)
Gene ID: k141_223331_19
Type:
Location: 23227 - 23412 (-)
Gene ID: k141_223331_20
Type: CAZyme
Location: 23447 - 24469 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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